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The map label for this gene is ygfA [C]

Identifier: 115353131

GI number: 115353131

Start: 3400924

End: 3401532

Strand: Direct

Name: ygfA [C]

Synonym: Bamb_3080

Alternate gene names: 115353131

Gene position: 3400924-3401532 (Clockwise)

Preceding gene: 115353126

Following gene: 115353133

Centisome position: 95.62

GC content: 71.1

Gene sequence:

>609_bases
ATGGAGCACGAATTGAGCGAAAGCATAGCATGCAACCCTGTGCCGAACCCGAAGGTTGCACTGCGTAAAACGCTGGCCGG
CGCGCGTCGCGACGCCGCGTCGCAGCCCGCCGCGAACGCCGCGCTCGACGCGCGCCTGCGCGCGTTGCTCGAACGCCTCG
CGCCGCGCACGGTCGGCTTCTACTGGCCGCTGCCGGGCGAATTCGACGCGCGCGACGCGGTGCTCGCGTGGTCCGCGGCC
GGCAGCGGCCGCCGTGCCGCGCTGCCGGTGATCGGCGAGCGTCACACACCGCTCGCGTTCCATGCGTGGGATGCGCACAC
GCCGATGCGCGAAGGGCATCACCGGATTCCGGAGCCGGCGTCGGGGGTCGTCGTCGTGCCCGACCTGTTGCTGATTCCGT
GTGTGGGATTCGATCTGGAGCGCTACCGGCTCGGCTATGGCGGCGGCTACTACGACCGCACGCTCGCGGTGTGGCCGGGC
GACACGCTGCCGGTGACGGTCGGCATCGCCTATGAAGCGTGCCGCGTCGATGCGCTGCCGGCCGAGGCGCACGATCTCGC
GATGCGCTGGATCGTCACCGACGCCGCGCTTTACCCGGCCGCCGGATGA

Upstream 100 bases:

>100_bases
GGTGCGGCGCACGCGGCCGTGCCCGCGACGAGCGCGGCGGCGGAAAGCGTGAGCGCGACCGCGCGATATACTCGGAAAAG
GCTGTTCGACATCGTTTTGA

Downstream 100 bases:

>100_bases
CGCGGCGCGCGACACCGCGCCAGCCGCATGCCGCGCGTTACCGCGTTCCCCGTTCCGTTCGCAATCGTTTACAGCGAGGC
CGCCGCCCGCGCGGCCGTAT

Product: 5-formyltetrahydrofolate cyclo-ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MEHELSESIACNPVPNPKVALRKTLAGARRDAASQPAANAALDARLRALLERLAPRTVGFYWPLPGEFDARDAVLAWSAA
GSGRRAALPVIGERHTPLAFHAWDAHTPMREGHHRIPEPASGVVVVPDLLLIPCVGFDLERYRLGYGGGYYDRTLAVWPG
DTLPVTVGIAYEACRVDALPAEAHDLAMRWIVTDAALYPAAG

Sequences:

>Translated_202_residues
MEHELSESIACNPVPNPKVALRKTLAGARRDAASQPAANAALDARLRALLERLAPRTVGFYWPLPGEFDARDAVLAWSAA
GSGRRAALPVIGERHTPLAFHAWDAHTPMREGHHRIPEPASGVVVVPDLLLIPCVGFDLERYRLGYGGGYYDRTLAVWPG
DTLPVTVGIAYEACRVDALPAEAHDLAMRWIVTDAALYPAAG
>Mature_202_residues
MEHELSESIACNPVPNPKVALRKTLAGARRDAASQPAANAALDARLRALLERLAPRTVGFYWPLPGEFDARDAVLAWSAA
GSGRRAALPVIGERHTPLAFHAWDAHTPMREGHHRIPEPASGVVVVPDLLLIPCVGFDLERYRLGYGGGYYDRTLAVWPG
DTLPVTVGIAYEACRVDALPAEAHDLAMRWIVTDAALYPAAG

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 21818; Mature: 21818

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHELSESIACNPVPNPKVALRKTLAGARRDAASQPAANAALDARLRALLERLAPRTVGF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
YWPLPGEFDARDAVLAWSAAGSGRRAALPVIGERHTPLAFHAWDAHTPMREGHHRIPEPA
EECCCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCC
SGVVVVPDLLLIPCVGFDLERYRLGYGGGYYDRTLAVWPGDTLPVTVGIAYEACRVDALP
CCEEECCHHHHHHCCCCCHHHEEECCCCCCCCCEEEECCCCCEEEEEEEEEEEHCCCCCC
AEAHDLAMRWIVTDAALYPAAG
CCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEHELSESIACNPVPNPKVALRKTLAGARRDAASQPAANAALDARLRALLERLAPRTVGF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
YWPLPGEFDARDAVLAWSAAGSGRRAALPVIGERHTPLAFHAWDAHTPMREGHHRIPEPA
EECCCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCC
SGVVVVPDLLLIPCVGFDLERYRLGYGGGYYDRTLAVWPGDTLPVTVGIAYEACRVDALP
CCEEECCHHHHHHCCCCCHHHEEECCCCCCCCCEEEECCCCCEEEEEEEEEEEHCCCCCC
AEAHDLAMRWIVTDAALYPAAG
CCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]