| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115353123
Identifier: 115353123
GI number: 115353123
Start: 3391641
End: 3391973
Strand: Direct
Name: 115353123
Synonym: Bamb_3072
Alternate gene names: NA
Gene position: 3391641-3391973 (Clockwise)
Preceding gene: 162389965
Following gene: 115353124
Centisome position: 95.36
GC content: 68.47
Gene sequence:
>333_bases GTGAAGATCGATTCCACTCCGAAACCGAGCCCCCTCGCGTCGACCGGCAACGGCGCGACCCGCGCGCAATCCGGCGCGGC TTCGTCGTCGCCCGCGCAGGCGGCCGACGCTGGATCGACCGGCGGCGACACGACCGTGAACCTGTCGGGTCTGTCGGGCC AGCTGCGTTCGCAGTCGGCCTCGGGCAGCGCCGACATCGACACGGCCCTCGTCCAGTCGATCAAGGACGCGCTGAACGAC GGCACGCTGACGATCGACGTGAACAAGATCGCCGACGGCGTATTGAATACCGCCCGCGACCTGCTGCAACAGCAGCGCTC GCAGGGCAACTGA
Upstream 100 bases:
>100_bases GATTGCAAAGAATTGTTTATTCGGAGCCTGTCGGGCTCACGATGCTAAAGTTCGGGCCGACCCGGCCGTTATCTGGGTCA TACCGTACAGGAAACCCATC
Downstream 100 bases:
>100_bases GCCGGCCAGGGGCCCGTCACGCCCTGACCGGTCCCCTGGTTTGCCGGCATGCGCCACCGCGTGCCGGCGCGACGAGCATG ACGCGATGAGAGAAGAGCTG
Product: putative anti-sigma-28 factor FlgM
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MKIDSTPKPSPLASTGNGATRAQSGAASSSPAQAADAGSTGGDTTVNLSGLSGQLRSQSASGSADIDTALVQSIKDALND GTLTIDVNKIADGVLNTARDLLQQQRSQGN
Sequences:
>Translated_110_residues MKIDSTPKPSPLASTGNGATRAQSGAASSSPAQAADAGSTGGDTTVNLSGLSGQLRSQSASGSADIDTALVQSIKDALND GTLTIDVNKIADGVLNTARDLLQQQRSQGN >Mature_110_residues MKIDSTPKPSPLASTGNGATRAQSGAASSSPAQAADAGSTGGDTTVNLSGLSGQLRSQSASGSADIDTALVQSIKDALND GTLTIDVNKIADGVLNTARDLLQQQRSQGN
Specific function: Unknown
COG id: COG2747
COG function: function code KNU; Negative regulator of flagellin synthesis (anti-sigma28 factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10913; Mature: 10913
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDSTPKPSPLASTGNGATRAQSGAASSSPAQAADAGSTGGDTTVNLSGLSGQLRSQSA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCC SGSADIDTALVQSIKDALNDGTLTIDVNKIADGVLNTARDLLQQQRSQGN CCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIDSTPKPSPLASTGNGATRAQSGAASSSPAQAADAGSTGGDTTVNLSGLSGQLRSQSA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCC SGSADIDTALVQSIKDALNDGTLTIDVNKIADGVLNTARDLLQQQRSQGN CCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA