| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is ordL [H]
Identifier: 115353100
GI number: 115353100
Start: 3367660
End: 3368961
Strand: Direct
Name: ordL [H]
Synonym: Bamb_3049
Alternate gene names: 115353100
Gene position: 3367660-3368961 (Clockwise)
Preceding gene: 115353099
Following gene: 115353105
Centisome position: 94.69
GC content: 69.28
Gene sequence:
>1302_bases ATGCAGACATTCGCCAACCAGCCGCACGTCGCGTCGTACTACGCGGCGAGCGCCAACGATATGACCCGCCACGCGCCGCT CGCCGGCGCGACCGACGTCGACGTGTGCGTGATCGGCGCGGGCCTCACTGGTTTGTCCGCCGCGCTCAACCTCGCCGAGC GCGGCCATTCGGTGACCGTGCTCGAGGCGTCGCGGGTCGGATGGGCGGCGAGCGGACGCAACGGCGGCCAGCTGATCGGC GGCTTCGCGTGCGACATCGACACCTTCGCCAACTTCATGCCGGAAAGCGACGTGAAGCGGATCTGGGACATGGGGCTCGA AACGCTGTCGCTCGTGAAGTCGCGCATCGCGCAACACGACATCGACTGCGCGCTCATGTCCGGTTACTTGACCGCCGCGA ACACCGAGCGCGACGCCGATGCGCTGAAGCGCTGGCGCGACGAGGCCGCGAAGCGCTTCGGCTACGACCGCTTCCATTTC GTCGAAGCGGACGAACTCGGCGATTACGTACAGTCGGCGCGCTATCGCGGCGGCCTGTACGACCCCGACAGCGGCCACCT GCATCCGCTGAACTACACGCTCGGGCTCGCGCGCGCGGCGACCGACGCCGGCGTGCGGATCCACGAGGACAGCTGCGTGA CGCGCATGCGCGACGTCGCGGGCGGTCATGTCGTCGAAACGGACCACGGGCACGTGCGTGCGCGCTTCGTCGTGCTCGCC TGCAACACCTACGTCGGCACGCTCGCGCCCGCGCTGTCGAGAAAGATCATGCCGGTCGGCACCTACGTGATCGCGACCGA GCCGCTCGGCGAAGCGCGCGCCGCCGCGCTGATGCCCGCGCGCGCGGCGATCTGCGACAGCCGCTTCGTGCTCGACTATT TCCGGCCGGCGCCCGACACACGGCTCGTGTGGGGCGGCAAGGTCAGCTATTCGACGCGGCCGCCGCGCAATCTCGCCGCC GCGATGCGCGCGGACATGCTGAAGACGTTCCCGCAGCTCGCGGACGTGAAGGTCGACTACGCATGGGGCGGCTTCGTCGA CATCACGATGAACCGCGCGCCGCACTTCGGGCGTATCGCGCCGACGATGTATTTCGCGCAGGGTTTCTCGGGACACGGCG TGAACACGACCGCGCTCGCGGGCAAGCTGATCGCGGAGGCGATCGACGGCCAGGCGAGCCGCTTCGACCTGTTCGGCAGG ATCCGGCATCGCGACTTCCCCGGCGGCGCGACGCTGCGCACGCCGGCGCTGGTGCTCGCGATGAGCTGGTACCGGCTGCT CGATGCGCTCGGCGTGCATTGA
Upstream 100 bases:
>100_bases CCCGGCGGCGACGCGTGGCGGCAGCCCGCGCTCGAACTCGGGATGCTGTACCACCGCGTGCGCGAGCTGTTCTGAGCCCT CTTTCTCTGTTCTCCTGACC
Downstream 100 bases:
>100_bases GCATCGTGCCGCGGGGATGCGGTGCAAGCGGTGAACGCCGCCGCACGCCGAGGCAAAACGAAAACGGCCGCGCAACGAGC GCGGCCGTTCGATCGAATCG
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MQTFANQPHVASYYAASANDMTRHAPLAGATDVDVCVIGAGLTGLSAALNLAERGHSVTVLEASRVGWAASGRNGGQLIG GFACDIDTFANFMPESDVKRIWDMGLETLSLVKSRIAQHDIDCALMSGYLTAANTERDADALKRWRDEAAKRFGYDRFHF VEADELGDYVQSARYRGGLYDPDSGHLHPLNYTLGLARAATDAGVRIHEDSCVTRMRDVAGGHVVETDHGHVRARFVVLA CNTYVGTLAPALSRKIMPVGTYVIATEPLGEARAAALMPARAAICDSRFVLDYFRPAPDTRLVWGGKVSYSTRPPRNLAA AMRADMLKTFPQLADVKVDYAWGGFVDITMNRAPHFGRIAPTMYFAQGFSGHGVNTTALAGKLIAEAIDGQASRFDLFGR IRHRDFPGGATLRTPALVLAMSWYRLLDALGVH
Sequences:
>Translated_433_residues MQTFANQPHVASYYAASANDMTRHAPLAGATDVDVCVIGAGLTGLSAALNLAERGHSVTVLEASRVGWAASGRNGGQLIG GFACDIDTFANFMPESDVKRIWDMGLETLSLVKSRIAQHDIDCALMSGYLTAANTERDADALKRWRDEAAKRFGYDRFHF VEADELGDYVQSARYRGGLYDPDSGHLHPLNYTLGLARAATDAGVRIHEDSCVTRMRDVAGGHVVETDHGHVRARFVVLA CNTYVGTLAPALSRKIMPVGTYVIATEPLGEARAAALMPARAAICDSRFVLDYFRPAPDTRLVWGGKVSYSTRPPRNLAA AMRADMLKTFPQLADVKVDYAWGGFVDITMNRAPHFGRIAPTMYFAQGFSGHGVNTTALAGKLIAEAIDGQASRFDLFGR IRHRDFPGGATLRTPALVLAMSWYRLLDALGVH >Mature_433_residues MQTFANQPHVASYYAASANDMTRHAPLAGATDVDVCVIGAGLTGLSAALNLAERGHSVTVLEASRVGWAASGRNGGQLIG GFACDIDTFANFMPESDVKRIWDMGLETLSLVKSRIAQHDIDCALMSGYLTAANTERDADALKRWRDEAAKRFGYDRFHF VEADELGDYVQSARYRGGLYDPDSGHLHPLNYTLGLARAATDAGVRIHEDSCVTRMRDVAGGHVVETDHGHVRARFVVLA CNTYVGTLAPALSRKIMPVGTYVIATEPLGEARAAALMPARAAICDSRFVLDYFRPAPDTRLVWGGKVSYSTRPPRNLAA AMRADMLKTFPQLADVKVDYAWGGFVDITMNRAPHFGRIAPTMYFAQGFSGHGVNTTALAGKLIAEAIDGQASRFDLFGR IRHRDFPGGATLRTPALVLAMSWYRLLDALGVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=425, Percent_Identity=42.1176470588235, Blast_Score=332, Evalue=2e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 46981; Mature: 46981
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTFANQPHVASYYAASANDMTRHAPLAGATDVDVCVIGAGLTGLSAALNLAERGHSVTV CCCCCCCCCCHHEEECCCCCCHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEE LEASRVGWAASGRNGGQLIGGFACDIDTFANFMPESDVKRIWDMGLETLSLVKSRIAQHD EEECCCCCCCCCCCCCCEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC IDCALMSGYLTAANTERDADALKRWRDEAAKRFGYDRFHFVEADELGDYVQSARYRGGLY CCHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCC DPDSGHLHPLNYTLGLARAATDAGVRIHEDSCVTRMRDVAGGHVVETDHGHVRARFVVLA CCCCCCEEECHHHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCEEECCCCCEEEEEEEEE CNTYVGTLAPALSRKIMPVGTYVIATEPLGEARAAALMPARAAICDSRFVLDYFRPAPDT ECHHHHHHHHHHHCCCEEECEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC RLVWGGKVSYSTRPPRNLAAAMRADMLKTFPQLADVKVDYAWGGFVDITMNRAPHFGRIA EEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCCCC PTMYFAQGFSGHGVNTTALAGKLIAEAIDGQASRFDLFGRIRHRDFPGGATLRTPALVLA HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH MSWYRLLDALGVH HHHHHHHHHHCCC >Mature Secondary Structure MQTFANQPHVASYYAASANDMTRHAPLAGATDVDVCVIGAGLTGLSAALNLAERGHSVTV CCCCCCCCCCHHEEECCCCCCHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEE LEASRVGWAASGRNGGQLIGGFACDIDTFANFMPESDVKRIWDMGLETLSLVKSRIAQHD EEECCCCCCCCCCCCCCEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC IDCALMSGYLTAANTERDADALKRWRDEAAKRFGYDRFHFVEADELGDYVQSARYRGGLY CCHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCC DPDSGHLHPLNYTLGLARAATDAGVRIHEDSCVTRMRDVAGGHVVETDHGHVRARFVVLA CCCCCCEEECHHHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCEEECCCCCEEEEEEEEE CNTYVGTLAPALSRKIMPVGTYVIATEPLGEARAAALMPARAAICDSRFVLDYFRPAPDT ECHHHHHHHHHHHCCCEEECEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC RLVWGGKVSYSTRPPRNLAAAMRADMLKTFPQLADVKVDYAWGGFVDITMNRAPHFGRIA EEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCCCC PTMYFAQGFSGHGVNTTALAGKLIAEAIDGQASRFDLFGRIRHRDFPGGATLRTPALVLA HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH MSWYRLLDALGVH HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]