| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is ggt [H]
Identifier: 115352987
GI number: 115352987
Start: 3239019
End: 3240899
Strand: Direct
Name: ggt [H]
Synonym: Bamb_2936
Alternate gene names: 115352987
Gene position: 3239019-3240899 (Clockwise)
Preceding gene: 115352986
Following gene: 115352991
Centisome position: 91.07
GC content: 71.03
Gene sequence:
>1881_bases ATGTTCGATCGGATTCGTCCGCATTCGCGTCCCTGGACGCTCGCCGCCGCAGTCGCATTCGCACTCGTCGCCTTCGGTGC CGGCTGCACGTCACCGTCCGCGCCGTCGGGCGCCGTCGTCCCGGTCGCCGCCGCATCGGGCGCCGCCGTGCCGCTGCCCG GCGTTCACTCCCCCGAACTGTCGTCGGGCTGGACCGACAAGCCGGGCTGGACCTCGCAGCACGCGATGATCGCGGCCGCG AACCCGCTCGCGACGCAGGCCGGCTACGACATGCTGAAGGCCGGCGGCACCGCGATCGACGCGGCGATCGCGACGCAGAT GGTGCTCGCGCTCGTCGAGCCGCAATCGTCGGGCATCGGCGGCGGCGCGTTCATGCTGTATTTCGACGGCCACGCGACGC AGGCGTACGACGGCCGCGAGACCGCGCCGGCCGCCGCCACCGAGCGCCTGTTCTACGGGCCGACCGGCCAGCCGATGCGC TTCTACGAAGGTGTCGTCGGCGGGCGCTCGGTCGGCACGCCGGGCGTGCTGCGGATGCTCGACGCCGCGCATCGCGCGCA CGGCAAGCTGCCGTGGCGCCGGCTGTTCCAGCCCGCGATCCGGCTCGCCGAGCACGGCTTCACGATCAGCCCGCGGCTGG CGATGCTGATCGCGAACGACAAGTACCTGATGAACGACCCGGCCGCGCGCGCGTACTTCTACAACGACGACGGCACGCCG AAGGCGGCCGGCACCGTGCTGAAGAACCCCGCGCTCGCGACCGTGCTGCGCCAGGTCGCCGACCGCGGCGCGAACGCGTT CTACACCGGCGCGATCGCGCGCGACATCGTCGCGAAGGTGCGCAAGCACCCGACCAATCCGGGTCTGCTGTCGCTGCAGG ATCTCGCGCGCTACAAGGCGAAGGTGCGTGCGCCGCTGTGTACCGACTACCGGCGCTCGGTGGTGTGCGGGATGCCGCCG CCGTCGTCGGGCGGCCTCGCGATCGCGCAGATGCTCGGCATCCTGGAGACGATGCCCGACTGGCAGCAGATCGGCGCGCA GAAGCCGGTGCGCAACGAGGTCGGCTACGAGCCGACGCCGTTCGCCGCGCATCTGTTCAGCGAGGCCGGCCGCCTCGCGT TCGCGGACCGCGCGCGCTACGTCGCCGATCCCGATTTCGCGCCGCTGCCGGGCGGCAGTTGGGCGAGCCTCACCGACAAG GCCTACCTCGCGCAGCGTGCGCGCCTGATCGGCGACAACAGCATGGGCGTCGCGCAGGCCGGCACGCCGCAGGGCGCGGC GCTCGCGCTGGCCGACGACCGCAGCCCCGAATTGCCGTCGACCTCCGACATCGCGATCGTCGACCGCTACGGTCAGGCGC TGTCGATGACGACCAGCGTCGAGGACGCGTTCGGTTCGCGGCTGATGGTGCGCGGCTTCATGCTGAACAACCAGCTCACC GATTTCTCGTTCGTGTCGAGCGAGAACGGCCGGCCGGTCGCGAACCGTGTGCAACCCGGCAAGCGGCCGCGCTCGGCGAT GTCGCCGGAGCTCGTGTTCGACCAGAAGACGAAGCAGGTGACGATGATCGTCGGCTCGGCCGGCGGCCCCGCGATCATCA ACCACGTCGCGAAAACGCTGATCGGCGTGCTCGACTGGGGGATGACGATGCAGCAGGCGATCGCGCTGCCGAACGTCGGG TCGACGAACGGACCGACGCAGCTCGAGCGCGGCCGCGTGTCGGACGCGCTCGTCGACGGGCTGAAGGGACGTGGGCACGA CGTGCAGGTCGTCGAGTTGAACTCGGGACTGCAGGGGATCCAGCGGCTGAACCTGCAGGGTCAGACGGTGTGGTTCGGCG GCGCGGATCCGCGGCGCGAAGGAGTCGCGATGGGGGATTGA
Upstream 100 bases:
>100_bases GACAATCCGCCGCCCGCACGGCGACAATAGCGCGCCGCCCGTGCGGAGCGCGTGCCGCGCACACGCCGCCGCCTTCGAAT TCACCGTTGCCGAGGGTTCA
Downstream 100 bases:
>100_bases GGCTGCGGAAGCGGTGCGGCCCGCGCATGCGGTATCAGACTGGCAACCTTGCTCATGCCGAAAATGGCCATGCCCAGACA GGGTGAACAAGATACGCTCC
Product: gamma-glutamyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 626; Mature: 626
Protein sequence:
>626_residues MFDRIRPHSRPWTLAAAVAFALVAFGAGCTSPSAPSGAVVPVAAASGAAVPLPGVHSPELSSGWTDKPGWTSQHAMIAAA NPLATQAGYDMLKAGGTAIDAAIATQMVLALVEPQSSGIGGGAFMLYFDGHATQAYDGRETAPAAATERLFYGPTGQPMR FYEGVVGGRSVGTPGVLRMLDAAHRAHGKLPWRRLFQPAIRLAEHGFTISPRLAMLIANDKYLMNDPAARAYFYNDDGTP KAAGTVLKNPALATVLRQVADRGANAFYTGAIARDIVAKVRKHPTNPGLLSLQDLARYKAKVRAPLCTDYRRSVVCGMPP PSSGGLAIAQMLGILETMPDWQQIGAQKPVRNEVGYEPTPFAAHLFSEAGRLAFADRARYVADPDFAPLPGGSWASLTDK AYLAQRARLIGDNSMGVAQAGTPQGAALALADDRSPELPSTSDIAIVDRYGQALSMTTSVEDAFGSRLMVRGFMLNNQLT DFSFVSSENGRPVANRVQPGKRPRSAMSPELVFDQKTKQVTMIVGSAGGPAIINHVAKTLIGVLDWGMTMQQAIALPNVG STNGPTQLERGRVSDALVDGLKGRGHDVQVVELNSGLQGIQRLNLQGQTVWFGGADPRREGVAMGD
Sequences:
>Translated_626_residues MFDRIRPHSRPWTLAAAVAFALVAFGAGCTSPSAPSGAVVPVAAASGAAVPLPGVHSPELSSGWTDKPGWTSQHAMIAAA NPLATQAGYDMLKAGGTAIDAAIATQMVLALVEPQSSGIGGGAFMLYFDGHATQAYDGRETAPAAATERLFYGPTGQPMR FYEGVVGGRSVGTPGVLRMLDAAHRAHGKLPWRRLFQPAIRLAEHGFTISPRLAMLIANDKYLMNDPAARAYFYNDDGTP KAAGTVLKNPALATVLRQVADRGANAFYTGAIARDIVAKVRKHPTNPGLLSLQDLARYKAKVRAPLCTDYRRSVVCGMPP PSSGGLAIAQMLGILETMPDWQQIGAQKPVRNEVGYEPTPFAAHLFSEAGRLAFADRARYVADPDFAPLPGGSWASLTDK AYLAQRARLIGDNSMGVAQAGTPQGAALALADDRSPELPSTSDIAIVDRYGQALSMTTSVEDAFGSRLMVRGFMLNNQLT DFSFVSSENGRPVANRVQPGKRPRSAMSPELVFDQKTKQVTMIVGSAGGPAIINHVAKTLIGVLDWGMTMQQAIALPNVG STNGPTQLERGRVSDALVDGLKGRGHDVQVVELNSGLQGIQRLNLQGQTVWFGGADPRREGVAMGD >Mature_626_residues MFDRIRPHSRPWTLAAAVAFALVAFGAGCTSPSAPSGAVVPVAAASGAAVPLPGVHSPELSSGWTDKPGWTSQHAMIAAA NPLATQAGYDMLKAGGTAIDAAIATQMVLALVEPQSSGIGGGAFMLYFDGHATQAYDGRETAPAAATERLFYGPTGQPMR FYEGVVGGRSVGTPGVLRMLDAAHRAHGKLPWRRLFQPAIRLAEHGFTISPRLAMLIANDKYLMNDPAARAYFYNDDGTP KAAGTVLKNPALATVLRQVADRGANAFYTGAIARDIVAKVRKHPTNPGLLSLQDLARYKAKVRAPLCTDYRRSVVCGMPP PSSGGLAIAQMLGILETMPDWQQIGAQKPVRNEVGYEPTPFAAHLFSEAGRLAFADRARYVADPDFAPLPGGSWASLTDK AYLAQRARLIGDNSMGVAQAGTPQGAALALADDRSPELPSTSDIAIVDRYGQALSMTTSVEDAFGSRLMVRGFMLNNQLT DFSFVSSENGRPVANRVQPGKRPRSAMSPELVFDQKTKQVTMIVGSAGGPAIINHVAKTLIGVLDWGMTMQQAIALPNVG STNGPTQLERGRVSDALVDGLKGRGHDVQVVELNSGLQGIQRLNLQGQTVWFGGADPRREGVAMGD
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=558, Percent_Identity=29.7491039426523, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI73915090, Length=558, Percent_Identity=29.7491039426523, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI73915096, Length=558, Percent_Identity=29.7491039426523, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI73915094, Length=558, Percent_Identity=29.7491039426523, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI113429324, Length=527, Percent_Identity=29.6015180265655, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI113429326, Length=532, Percent_Identity=29.3233082706767, Blast_Score=185, Evalue=1e-46, Organism=Homo sapiens, GI153266885, Length=569, Percent_Identity=28.1195079086116, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI153266901, Length=570, Percent_Identity=27.719298245614, Blast_Score=145, Evalue=9e-35, Organism=Homo sapiens, GI109148539, Length=530, Percent_Identity=27.3584905660377, Blast_Score=136, Evalue=8e-32, Organism=Homo sapiens, GI153266907, Length=567, Percent_Identity=27.1604938271605, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI30581157, Length=195, Percent_Identity=31.7948717948718, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI30581155, Length=195, Percent_Identity=31.7948717948718, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI171543825, Length=215, Percent_Identity=30.6976744186047, Blast_Score=68, Evalue=3e-11, Organism=Escherichia coli, GI1789856, Length=562, Percent_Identity=33.6298932384342, Blast_Score=261, Evalue=9e-71, Organism=Caenorhabditis elegans, GI72000294, Length=569, Percent_Identity=29.5254833040422, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI212646519, Length=569, Percent_Identity=29.5254833040422, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI193208245, Length=520, Percent_Identity=31.1538461538462, Blast_Score=205, Evalue=7e-53, Organism=Caenorhabditis elegans, GI193208247, Length=520, Percent_Identity=31.1538461538462, Blast_Score=204, Evalue=9e-53, Organism=Caenorhabditis elegans, GI17542894, Length=566, Percent_Identity=28.9752650176678, Blast_Score=201, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17506189, Length=564, Percent_Identity=27.4822695035461, Blast_Score=165, Evalue=6e-41, Organism=Caenorhabditis elegans, GI72001497, Length=235, Percent_Identity=26.3829787234043, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI72001495, Length=235, Percent_Identity=26.3829787234043, Blast_Score=74, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323330, Length=553, Percent_Identity=25.8589511754069, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI18859893, Length=557, Percent_Identity=30.3411131059246, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI45551474, Length=565, Percent_Identity=29.5575221238938, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI24642670, Length=565, Percent_Identity=29.5575221238938, Blast_Score=181, Evalue=2e-45, Organism=Drosophila melanogaster, GI24642666, Length=565, Percent_Identity=29.5575221238938, Blast_Score=181, Evalue=2e-45, Organism=Drosophila melanogaster, GI161077880, Length=565, Percent_Identity=29.5575221238938, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI161077878, Length=565, Percent_Identity=29.5575221238938, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI161077496, Length=529, Percent_Identity=26.8431001890359, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI18859741, Length=584, Percent_Identity=25.8561643835616, Blast_Score=126, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 66190; Mature: 66190
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDRIRPHSRPWTLAAAVAFALVAFGAGCTSPSAPSGAVVPVAAASGAAVPLPGVHSPEL CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC SSGWTDKPGWTSQHAMIAAANPLATQAGYDMLKAGGTAIDAAIATQMVLALVEPQSSGIG CCCCCCCCCCCCCCEEEEECCCHHHHHCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC GGAFMLYFDGHATQAYDGRETAPAAATERLFYGPTGQPMRFYEGVVGGRSVGTPGVLRML CCEEEEEEECCCCCCCCCCCCCCHHHHCCEEECCCCCCHHHHHHCCCCCCCCCHHHHHHH DAAHRAHGKLPWRRLFQPAIRLAEHGFTISPRLAMLIANDKYLMNDPAARAYFYNDDGTP HHHHHHCCCCCHHHHHHHHHHHHHCCCEECCCEEEEEECCCEEECCCCCEEEEECCCCCC KAAGTVLKNPALATVLRQVADRGANAFYTGAIARDIVAKVRKHPTNPGLLSLQDLARYKA HHHHHHHCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHH KVRAPLCTDYRRSVVCGMPPPSSGGLAIAQMLGILETMPDWQQIGAQKPVRNEVGYEPTP HHCCCCHHHCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCHHHCCCCCCC FAAHLFSEAGRLAFADRARYVADPDFAPLPGGSWASLTDKAYLAQRARLIGDNSMGVAQA HHHHHHHHCCCEEEHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC GTPQGAALALADDRSPELPSTSDIAIVDRYGQALSMTTSVEDAFGSRLMVRGFMLNNQLT CCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHCCCEEHEEEECCCCCC DFSFVSSENGRPVANRVQPGKRPRSAMSPELVFDQKTKQVTMIVGSAGGPAIINHVAKTL CEEEECCCCCCCHHHHCCCCCCCCHHCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHHH IGVLDWGMTMQQAIALPNVGSTNGPTQLERGRVSDALVDGLKGRGHDVQVVELNSGLQGI HHHHHCCHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCCCEEEEEECCCHHHH QRLNLQGQTVWFGGADPRREGVAMGD HHHCCCCCEEEECCCCCHHCCCCCCC >Mature Secondary Structure MFDRIRPHSRPWTLAAAVAFALVAFGAGCTSPSAPSGAVVPVAAASGAAVPLPGVHSPEL CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC SSGWTDKPGWTSQHAMIAAANPLATQAGYDMLKAGGTAIDAAIATQMVLALVEPQSSGIG CCCCCCCCCCCCCCEEEEECCCHHHHHCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC GGAFMLYFDGHATQAYDGRETAPAAATERLFYGPTGQPMRFYEGVVGGRSVGTPGVLRML CCEEEEEEECCCCCCCCCCCCCCHHHHCCEEECCCCCCHHHHHHCCCCCCCCCHHHHHHH DAAHRAHGKLPWRRLFQPAIRLAEHGFTISPRLAMLIANDKYLMNDPAARAYFYNDDGTP HHHHHHCCCCCHHHHHHHHHHHHHCCCEECCCEEEEEECCCEEECCCCCEEEEECCCCCC KAAGTVLKNPALATVLRQVADRGANAFYTGAIARDIVAKVRKHPTNPGLLSLQDLARYKA HHHHHHHCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHH KVRAPLCTDYRRSVVCGMPPPSSGGLAIAQMLGILETMPDWQQIGAQKPVRNEVGYEPTP HHCCCCHHHCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCHHHCCCCCCC FAAHLFSEAGRLAFADRARYVADPDFAPLPGGSWASLTDKAYLAQRARLIGDNSMGVAQA HHHHHHHHCCCEEEHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC GTPQGAALALADDRSPELPSTSDIAIVDRYGQALSMTTSVEDAFGSRLMVRGFMLNNQLT CCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHCCCEEHEEEECCCCCC DFSFVSSENGRPVANRVQPGKRPRSAMSPELVFDQKTKQVTMIVGSAGGPAIINHVAKTL CEEEECCCCCCCHHHHCCCCCCCCHHCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHHH IGVLDWGMTMQQAIALPNVGSTNGPTQLERGRVSDALVDGLKGRGHDVQVVELNSGLQGI HHHHHCCHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCCCEEEEEECCCHHHH QRLNLQGQTVWFGGADPRREGVAMGD HHHCCCCCEEEECCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA