| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352943
Identifier: 115352943
GI number: 115352943
Start: 3192942
End: 3193232
Strand: Direct
Name: 115352943
Synonym: Bamb_2892
Alternate gene names: NA
Gene position: 3192942-3193232 (Clockwise)
Preceding gene: 115352940
Following gene: 115352956
Centisome position: 89.78
GC content: 63.92
Gene sequence:
>291_bases ATGTACGTCATCGACATCCATTACCACGCGTCGCTCGAACACATCGACGATGCGCTCGAACGCCACCGTGCGTATCTGCA GCCGCTGTTCGAGCGCGGCATCTTCATCGCGGCGGGGCCGAAGGTGCCGCGCAAAGGCGGCGTGATCCTCGCGGCCCGCA TCGATCGCGACGAACTGGACGCGATCCTCGACACCGATCCGTTCGTGACCGAAGGGCTCGCGACGTATCGGGTGACCGAA TTCAAGATCACGCGTGCCGCGCAGGGTTTCAACGTGCCGGCGCTGCCGTAA
Upstream 100 bases:
>100_bases GCGGCCGACGCACGACGGCCGGCACGACATGGAGCAGCCGCTGTGCTAAAAAGACCGGCTGGCCGGCGCGACACGCACCG GCGACATTCCGGGGCCATCC
Downstream 100 bases:
>100_bases CGCGCGCGAGCGCCGCTGCACGTGCGCAAGCACGCCGCCGCGGCAGTGCGACGCGGCGAATGCAGATCGAGGGAAAGAAG GAAGCATGCGTGACGGCGCG
Product: YCII-related
Products: NA
Alternate protein names: YCII-Related Protein; YCII-Related Domain Superfamily Protein; YCII-Like Protein; YCII-Related Domain-Containing Protein; Ycii-Related Protein; YCII-Related Domain Superfamily; YciI Domain-Containing Protein; GTP Cyclohydrolase II; YciL Domain-Containing Protein; YCII-Related Domain Family Protein
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MYVIDIHYHASLEHIDDALERHRAYLQPLFERGIFIAAGPKVPRKGGVILAARIDRDELDAILDTDPFVTEGLATYRVTE FKITRAAQGFNVPALP
Sequences:
>Translated_96_residues MYVIDIHYHASLEHIDDALERHRAYLQPLFERGIFIAAGPKVPRKGGVILAARIDRDELDAILDTDPFVTEGLATYRVTE FKITRAAQGFNVPALP >Mature_96_residues MYVIDIHYHASLEHIDDALERHRAYLQPLFERGIFIAAGPKVPRKGGVILAARIDRDELDAILDTDPFVTEGLATYRVTE FKITRAAQGFNVPALP
Specific function: Unknown
COG id: COG2350
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10789; Mature: 10789
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVIDIHYHASLEHIDDALERHRAYLQPLFERGIFIAAGPKVPRKGGVILAARIDRDELD CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEECCHHHHH AILDTDPFVTEGLATYRVTEFKITRAAQGFNVPALP HHCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCC >Mature Secondary Structure MYVIDIHYHASLEHIDDALERHRAYLQPLFERGIFIAAGPKVPRKGGVILAARIDRDELD CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEECCHHHHH AILDTDPFVTEGLATYRVTEFKITRAAQGFNVPALP HHCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA