| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352940
Identifier: 115352940
GI number: 115352940
Start: 3189754
End: 3190062
Strand: Direct
Name: 115352940
Synonym: Bamb_2889
Alternate gene names: NA
Gene position: 3189754-3190062 (Clockwise)
Preceding gene: 115352931
Following gene: 115352943
Centisome position: 89.69
GC content: 66.99
Gene sequence:
>309_bases ATGAAACGGGCGATCCGTGCGCTCGCGTGTGCGGCCATTGCACTGGTGCTGCCGGGCGCGGCATTCGCGCTGGGCGACGA CTACGCGCAGTACGACGACTGCATGCTCAACGCGCTGCGCGAAAGCCGTAACGGCGCGGCGGCCCAGCTGATCCAGCGCT CGTGCGATGCGCTGTACCGCAACAACGCGATGCTGCTGCCACGCGAGCGGCGCTTTCACGAGTGCGTCGTGCAGTCGCTG CCGGGCGTACGCGACAACTACGCGATCCAGCAGATCATGTCGATCTGCTCGCGGCGCGGCGAGATGTGA
Upstream 100 bases:
>100_bases CCGACGGCGGTCCGCGCACGGTATCGGCGCAACGCGTCAGCCGCGCTTGCGGCTTTACGCTATGCTGTCCGCCGACCCCA TCCCCACCTTCGGAGGGCAC
Downstream 100 bases:
>100_bases GCACGCGCCGACCGCCTGGCGCCGGGTGGCCGTCCAGCGGCCACGCCAATGAAAAAGGGCCTGTGCGAGACAGGCCCTTT CGTTTCAGGTTTCAGCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MKRAIRALACAAIALVLPGAAFALGDDYAQYDDCMLNALRESRNGAAAQLIQRSCDALYRNNAMLLPRERRFHECVVQSL PGVRDNYAIQQIMSICSRRGEM
Sequences:
>Translated_102_residues MKRAIRALACAAIALVLPGAAFALGDDYAQYDDCMLNALRESRNGAAAQLIQRSCDALYRNNAMLLPRERRFHECVVQSL PGVRDNYAIQQIMSICSRRGEM >Mature_102_residues MKRAIRALACAAIALVLPGAAFALGDDYAQYDDCMLNALRESRNGAAAQLIQRSCDALYRNNAMLLPRERRFHECVVQSL PGVRDNYAIQQIMSICSRRGEM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11363; Mature: 11363
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRAIRALACAAIALVLPGAAFALGDDYAQYDDCMLNALRESRNGAAAQLIQRSCDALYR CHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH NNAMLLPRERRFHECVVQSLPGVRDNYAIQQIMSICSRRGEM CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKRAIRALACAAIALVLPGAAFALGDDYAQYDDCMLNALRESRNGAAAQLIQRSCDALYR CHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH NNAMLLPRERRFHECVVQSLPGVRDNYAIQQIMSICSRRGEM CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA