Click here to switch to the map view.

The map label for this gene is pfpI [H]

Identifier: 115352844

GI number: 115352844

Start: 3081883

End: 3082464

Strand: Direct

Name: pfpI [H]

Synonym: Bamb_2793

Alternate gene names: 115352844

Gene position: 3081883-3082464 (Clockwise)

Preceding gene: 115352843

Following gene: 115352847

Centisome position: 86.65

GC content: 68.04

Gene sequence:

>582_bases
ATGGCCGCGAAGAAGATCCTGTTCCTGACCGGCGATTTCGCCGAAGACTACGAAACGATGGTGCCGTTCCAGGCGCTGCA
GGCCGTCGGCCATCACGTCGATGCAGTGTGCCCGGGCAAGCGCGCGGGCGACAAGATCAAGACCGCGATTCACGATTTCG
AGGGCGACCAGACCTACACCGAAAAGCCCGGTCACCTGTTCACGCTGAACGCGACGTTCGACGACGTCGATGCATCGGGC
TACGACGCGCTCGCGATCGCGGGCGGCCGTGCGCCCGAGTACCTGCGCCTGGATTCGAAGGTGATCGCGCTGGTGCGCGC
GTTCGCGGAAGCCGGCAAGCCGATCGCCGCGATCTGCCATGCGGCGCAGCTGCTCGCGGCCGCCGACGTGATCCGCGGCA
AGCGCATCTCGGCCTACCCGGCCTGCGCGCCCGAAGTGAAGCTCGCGGGCGGCGAATACGCGGACATCCCGGTCGATGCG
GCGGTGACCGACGCGCCGTTCGTCACCGCACCCGCATGGCCCGCGCATCCGGCCTGGCTCGCGCAGTTCCTCGTGCTGCT
CGGCACGCGCATCGAGCTGTAA

Upstream 100 bases:

>100_bases
AGTACACTGCGCTTTCGTCCTCGGGCCCGCTTCGCCGCCGTAGCGCCCGTCTGCCGCGCGCGGCGCGAACGGCCCTCAAT
GCTGTTCAATGGAGAAAGCC

Downstream 100 bases:

>100_bases
ATGCAGTTGAAATGAAATGAGGTGAAGCGCCGGGCGGCGGCGGGTTCGTGCGCCCGGTGCGCCGCGCCGGCCGCGACCGA
ACGCCGCGTGCGCGCCGTCG

Product: PfpI family intracellular peptidase

Products: NA

Alternate protein names: Intracellular protease I [H]

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MAAKKILFLTGDFAEDYETMVPFQALQAVGHHVDAVCPGKRAGDKIKTAIHDFEGDQTYTEKPGHLFTLNATFDDVDASG
YDALAIAGGRAPEYLRLDSKVIALVRAFAEAGKPIAAICHAAQLLAAADVIRGKRISAYPACAPEVKLAGGEYADIPVDA
AVTDAPFVTAPAWPAHPAWLAQFLVLLGTRIEL

Sequences:

>Translated_193_residues
MAAKKILFLTGDFAEDYETMVPFQALQAVGHHVDAVCPGKRAGDKIKTAIHDFEGDQTYTEKPGHLFTLNATFDDVDASG
YDALAIAGGRAPEYLRLDSKVIALVRAFAEAGKPIAAICHAAQLLAAADVIRGKRISAYPACAPEVKLAGGEYADIPVDA
AVTDAPFVTAPAWPAHPAWLAQFLVLLGTRIEL
>Mature_192_residues
AAKKILFLTGDFAEDYETMVPFQALQAVGHHVDAVCPGKRAGDKIKTAIHDFEGDQTYTEKPGHLFTLNATFDDVDASGY
DALAIAGGRAPEYLRLDSKVIALVRAFAEAGKPIAAICHAAQLLAAADVIRGKRISAYPACAPEVKLAGGEYADIPVDAA
VTDAPFVTAPAWPAHPAWLAQFLVLLGTRIEL

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=186, Percent_Identity=34.9462365591398, Blast_Score=100, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 20502; Mature: 20370

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAKKILFLTGDFAEDYETMVPFQALQAVGHHVDAVCPGKRAGDKIKTAIHDFEGDQTYT
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCC
EKPGHLFTLNATFDDVDASGYDALAIAGGRAPEYLRLDSKVIALVRAFAEAGKPIAAICH
CCCCEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AAQLLAAADVIRGKRISAYPACAPEVKLAGGEYADIPVDAAVTDAPFVTAPAWPAHPAWL
HHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCEECCCCEEECCCCCCCHHHH
AQFLVLLGTRIEL
HHHHHHHHHHCCC
>Mature Secondary Structure 
AAKKILFLTGDFAEDYETMVPFQALQAVGHHVDAVCPGKRAGDKIKTAIHDFEGDQTYT
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCC
EKPGHLFTLNATFDDVDASGYDALAIAGGRAPEYLRLDSKVIALVRAFAEAGKPIAAICH
CCCCEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AAQLLAAADVIRGKRISAYPACAPEVKLAGGEYADIPVDAAVTDAPFVTAPAWPAHPAWL
HHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCEECCCCEEECCCCCCCHHHH
AQFLVLLGTRIEL
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA