| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352768
Identifier: 115352768
GI number: 115352768
Start: 2994188
End: 2994436
Strand: Direct
Name: 115352768
Synonym: Bamb_2717
Alternate gene names: NA
Gene position: 2994188-2994436 (Clockwise)
Preceding gene: 115352766
Following gene: 115352770
Centisome position: 84.19
GC content: 70.28
Gene sequence:
>249_bases ATGCTCGAACTGCGCCCCGGCTGCGAATGCTGCAACAAGGACCTGCCGCCCGATTCGGCGGAAGCCCGCATCTGTACGTT TGACTGCACGTTCTGCGCGACCTGCACCGACGAGGTGCTGAAGGGCCGCTGCCCGAACTGCGGCGGCGACCTGGTCGCTC GCCCGCGCCGGCCGGCGAGCCTGCTCGCGAAGTATCCGGCGTCGACGGAGCGCATCCACAAGCCGGGCGGCTGCGCGAAC GCCGCCTGA
Upstream 100 bases:
>100_bases TTGGCCGGGCCGATCCATGCAGGTACAGTAGCGCGCACATGCGCCGCACGCAATGTCCGGCGGCGCCCGTCCCGACCCGT CCCAACCAAGGAAAACCGTC
Downstream 100 bases:
>100_bases CGGCGCCGCATCGCGCGCCGCTTCCCGTTACGACATCTCGATGCGCGCGCGCGTGATCGCGAGCAGCGACGCCATCGCGC GGCGCGCGCCGTCCTCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MLELRPGCECCNKDLPPDSAEARICTFDCTFCATCTDEVLKGRCPNCGGDLVARPRRPASLLAKYPASTERIHKPGGCAN AA
Sequences:
>Translated_82_residues MLELRPGCECCNKDLPPDSAEARICTFDCTFCATCTDEVLKGRCPNCGGDLVARPRRPASLLAKYPASTERIHKPGGCAN AA >Mature_82_residues MLELRPGCECCNKDLPPDSAEARICTFDCTFCATCTDEVLKGRCPNCGGDLVARPRRPASLLAKYPASTERIHKPGGCAN AA
Specific function: Unknown
COG id: COG3813
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010696 - InterPro: IPR013083 [H]
Pfam domain/function: PF06906 DUF1272 [H]
EC number: NA
Molecular weight: Translated: 8758; Mature: 8758
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
12.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 13.4 %Cys+Met (Translated Protein) 12.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 13.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELRPGCECCNKDLPPDSAEARICTFDCTFCATCTDEVLKGRCPNCGGDLVARPRRPAS CCCCCCCHHHCCCCCCCCCCCCEEEEECCCEECCCHHHHHCCCCCCCCCCCCCCCCCCHH LLAKYPASTERIHKPGGCANAA HHHHCCCCCCCEECCCCCCCCC >Mature Secondary Structure MLELRPGCECCNKDLPPDSAEARICTFDCTFCATCTDEVLKGRCPNCGGDLVARPRRPAS CCCCCCCHHHCCCCCCCCCCCCEEEEECCCEECCCHHHHHCCCCCCCCCCCCCCCCCCHH LLAKYPASTERIHKPGGCANAA HHHHCCCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8121412; 11481430 [H]