Click here to switch to the map view.

The map label for this gene is 115352737

Identifier: 115352737

GI number: 115352737

Start: 2957332

End: 2960007

Strand: Direct

Name: 115352737

Synonym: Bamb_2686

Alternate gene names: NA

Gene position: 2957332-2960007 (Clockwise)

Preceding gene: 115352736

Following gene: 115352738

Centisome position: 83.15

GC content: 64.69

Gene sequence:

>2676_bases
ATGTTAAGAAGCGCATTGCTGGCCGGACCGGTTCAGCACGAGCGCCTTGTCAAACTGGATACGCCGCTGGGCCCCAACGT
GCTGCTGCCGCATCGCGTCATCGGCCGATCACGGCTCGGGCGTCACTTCGAGTTCACGGTCGATACCGTGTCGGTATCCG
ACAACCTCGAGCTCAAGAAGCTGATCGCGCAGCCCGTCACGCTGTGGATCCTGCAGGCCGACCAGTCTTATGCGCCTCAC
CACGGCTACGTGCATTGCGCCCGCAGGCTCGGCTCGGACAGCGGCGTCACGCACTACCAGATCGTCTTCGCTTCGTTCCT
GCACTTCCTGAAGTTCCGCCGCGACCAGCGAATCTGGCAGGACCAGTCCGCGGACGACATCATTGCCGACGTGCTGAACC
AGCATCCGCAGGCCAAGGGTCGCTTCACCTTCAAGCTCCACCAGCCGCTGCCGCTCCGCTCGTTCTGCATGCAGTACGAG
GATGACTGGAATTTCGTGCATCGCCTGATGGAATCCGAAGGCCTGTATGGCTTCTGGGAACAGGACCAGGACGGCAAGTC
GCACCGGCTCGTCGTCGTCGACCGCGTCGACGCATTGCCCGCGCTATCGCCGCGAACGGTGCGCTTTCATCATGCGGGCA
CGGGTGACGAGGCCGACACGTTCGTCCAGTTCTCCGGCACGCGCACGCTGCGAAGCGTCGCCCGCGCGACACGCACGTTC
GACTATAAGCAGCCGCCGAGCGCGGCCAATCCGAAGGCGACCCATACGCCGACGATCGCCAATCAGGGCGACCTGCCGCC
GCAGCTCGAGGTCTACGAATACACCGGTGCGTACACGTATCCCGAACAGTCCCGCGGTGACCATCTGTCGAAGATATGGA
TGGAGGAACAGGAGTCGCGCGCGAAACGCTTTCATGGCGTCGGCGGCGTGCGGCGCATGGATGCCGGGCGGACCTTCGAG
CTGGCGGATCACGCCGAACACGACAAGGACGATGCCGGGCAGCGCGAATTCGCCGTGATCGAGACGGCGTGGGTCATCGT
CAACAACCTGCCCGTTGCGGACGAACAGGCGGTTTTCCCGCACAGCCTGCAAGCCGAGGTCGGCAGCATCGTGTTGGCAA
CCAATACGGGCCAGTCGCGCGTGCGTCATCCCGACGGCAGCGAAGGCTTCTTTCAGATCCGCGTCGAAGCCCAGCGCACG
ACCGTACCGTTCCGCAGCCCGCTCGAGCATGCGAAACCCGCGATGCATTTGCAAACGGCGATCGTCGTCGCGCCGCAGGG
CGAAGAAGTCCATACCGACGCACTCAACCGGGTCAAGGTTCGCTTCCATTGGGACCGCCTGAACGACGGCGACGAAAAGG
CGTCGTGCTGGCTGCGTGCCACCGCGTCGGATTCGGGCAATGGTTATGGGGCCGTTCACCCGCACCGCAGCGGCGAGGAG
GTGCTGGTCGATTTCCTCGGCGGCGACTGCGATCGCCCGATCATCGTCGGCAAGGTCTACAACGGCGCGACCAGTCCGCA
ATGGCACAGCAACGGCATTCTGTCCGGATACCGGTCGAAAGAATACGCGGGCGCCGGCTACAACCAGCTCGTGCTCGACG
ACGCGACCTCGCAGAACCGCGTGCACCTGTACAGCAGCCAGACCAACGCGCACCTGCATCTCGGCTACCTGATCGACCAC
ACGGGCAACAACCGCGGCAGCTATCTCGGCAGTGGTTTCGACCTGCGCTCCGACGCATACGGCGCCGTGCGCGCGAACCG
CGGCCTGTACGTCACGACGCATCCGAAACAGCCGGCGAGCCAGCCGCTCGACGTCGGCGAGACACAGCAGCAGCTCGTTC
GCGCCGAAGGCCTGCTGGAGGCCATGTCGGATGTCAGCGCCCAGCATCAGGCCGAGTCGCTCGACCCCGGCCACTCGGCG
CTGAAGCAGTTCACCGACGCAACGCAGAGCAGCGCGAGCGGCAGCGCGTCGGGCGGCCGGACCGCCGCCGGCGGAACCGG
TAGCGCCAATGCGTTCAAGGAGCCCGTGATGCTGTTCGGCAGCCCGGCCGGTATCGGGATGTCGACACAACAGTCCGTGC
AGCTTGCCGCGGACCAGCACGTCAACCTCGTCAGCGGGCAAAGCACGCACGTGGCCGCCGGAAAGTCGCTGATCGCGAGC
GTCCTCGACCGGATCAGCCTGTTCGCGCAGAACTCCGGGATCAAGCTGTTCGCCGGCAAGGGCAAGGTCGAAGTGCAGGC
GCACGCGGACAACATCGAACTGACCGCCCAGAAGGCGCTGAAGCTGATGGCGGTCACCGAGTCGATCGAAGGCGCCGCGG
CGAAGGAAATCCTGCTGACTTCCGGCGGCGCGTACATCCGCATCGCGAACGGCAACATCGAAGTGCACGCACCCGGCAAG
ATCGACATCAAGGGTGCGCAGCACGTGTTCAGCGGCCCCACGCACCTGTCGCAAACGATGCCGACCCTGCCGAACTCGAC
CGGCAACTACGATCAGGCGTTCATCGCGCACTGGGCCGGCACCGACATTCCGGTAGCGAACACGCGATACCAGATGTTCT
CGAACGGCAAGCTGCTCTCGGAAGGCGTCACCAATGCGGCAGGTGAGACGGGGCTCACGCAGAGCCACGTGCCGCACGAC
GTCGTCGTCAAGTTTCTAGGGAAATCGAATGGCTGA

Upstream 100 bases:

>100_bases
TTCGGGATAGCGCACGTTTATCTCATACAATTACCGGATTCCGCACGGGAGAGCGTGCGACCCAGCACAAAAAAAGCGAG
CACGGGTGATGAATTCGCAA

Downstream 100 bases:

>100_bases
CGGACAACAGGACAAGGTGCTCGGGACCGGTGCGGCGATGCTGACCCCGACGGGATACCAGGATCGGCCGAAGGTGGCGA
TCAATATCTGCGACAAGCAT

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; Rhs-Family Protein; Rhs Element Vgr Family; VGR-Like Protein; VGR-Related Type VI Secretion System Protein; Vgr Related Protein; Rhs Element Vgr Related Protein; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Family Protein; VgrG Protein; Rhs Element Vgr-Related Protein; Vgr Protein; VgrG Family T6SS G

Number of amino acids: Translated: 891; Mature: 891

Protein sequence:

>891_residues
MLRSALLAGPVQHERLVKLDTPLGPNVLLPHRVIGRSRLGRHFEFTVDTVSVSDNLELKKLIAQPVTLWILQADQSYAPH
HGYVHCARRLGSDSGVTHYQIVFASFLHFLKFRRDQRIWQDQSADDIIADVLNQHPQAKGRFTFKLHQPLPLRSFCMQYE
DDWNFVHRLMESEGLYGFWEQDQDGKSHRLVVVDRVDALPALSPRTVRFHHAGTGDEADTFVQFSGTRTLRSVARATRTF
DYKQPPSAANPKATHTPTIANQGDLPPQLEVYEYTGAYTYPEQSRGDHLSKIWMEEQESRAKRFHGVGGVRRMDAGRTFE
LADHAEHDKDDAGQREFAVIETAWVIVNNLPVADEQAVFPHSLQAEVGSIVLATNTGQSRVRHPDGSEGFFQIRVEAQRT
TVPFRSPLEHAKPAMHLQTAIVVAPQGEEVHTDALNRVKVRFHWDRLNDGDEKASCWLRATASDSGNGYGAVHPHRSGEE
VLVDFLGGDCDRPIIVGKVYNGATSPQWHSNGILSGYRSKEYAGAGYNQLVLDDATSQNRVHLYSSQTNAHLHLGYLIDH
TGNNRGSYLGSGFDLRSDAYGAVRANRGLYVTTHPKQPASQPLDVGETQQQLVRAEGLLEAMSDVSAQHQAESLDPGHSA
LKQFTDATQSSASGSASGGRTAAGGTGSANAFKEPVMLFGSPAGIGMSTQQSVQLAADQHVNLVSGQSTHVAAGKSLIAS
VLDRISLFAQNSGIKLFAGKGKVEVQAHADNIELTAQKALKLMAVTESIEGAAAKEILLTSGGAYIRIANGNIEVHAPGK
IDIKGAQHVFSGPTHLSQTMPTLPNSTGNYDQAFIAHWAGTDIPVANTRYQMFSNGKLLSEGVTNAAGETGLTQSHVPHD
VVVKFLGKSNG

Sequences:

>Translated_891_residues
MLRSALLAGPVQHERLVKLDTPLGPNVLLPHRVIGRSRLGRHFEFTVDTVSVSDNLELKKLIAQPVTLWILQADQSYAPH
HGYVHCARRLGSDSGVTHYQIVFASFLHFLKFRRDQRIWQDQSADDIIADVLNQHPQAKGRFTFKLHQPLPLRSFCMQYE
DDWNFVHRLMESEGLYGFWEQDQDGKSHRLVVVDRVDALPALSPRTVRFHHAGTGDEADTFVQFSGTRTLRSVARATRTF
DYKQPPSAANPKATHTPTIANQGDLPPQLEVYEYTGAYTYPEQSRGDHLSKIWMEEQESRAKRFHGVGGVRRMDAGRTFE
LADHAEHDKDDAGQREFAVIETAWVIVNNLPVADEQAVFPHSLQAEVGSIVLATNTGQSRVRHPDGSEGFFQIRVEAQRT
TVPFRSPLEHAKPAMHLQTAIVVAPQGEEVHTDALNRVKVRFHWDRLNDGDEKASCWLRATASDSGNGYGAVHPHRSGEE
VLVDFLGGDCDRPIIVGKVYNGATSPQWHSNGILSGYRSKEYAGAGYNQLVLDDATSQNRVHLYSSQTNAHLHLGYLIDH
TGNNRGSYLGSGFDLRSDAYGAVRANRGLYVTTHPKQPASQPLDVGETQQQLVRAEGLLEAMSDVSAQHQAESLDPGHSA
LKQFTDATQSSASGSASGGRTAAGGTGSANAFKEPVMLFGSPAGIGMSTQQSVQLAADQHVNLVSGQSTHVAAGKSLIAS
VLDRISLFAQNSGIKLFAGKGKVEVQAHADNIELTAQKALKLMAVTESIEGAAAKEILLTSGGAYIRIANGNIEVHAPGK
IDIKGAQHVFSGPTHLSQTMPTLPNSTGNYDQAFIAHWAGTDIPVANTRYQMFSNGKLLSEGVTNAAGETGLTQSHVPHD
VVVKFLGKSNG
>Mature_891_residues
MLRSALLAGPVQHERLVKLDTPLGPNVLLPHRVIGRSRLGRHFEFTVDTVSVSDNLELKKLIAQPVTLWILQADQSYAPH
HGYVHCARRLGSDSGVTHYQIVFASFLHFLKFRRDQRIWQDQSADDIIADVLNQHPQAKGRFTFKLHQPLPLRSFCMQYE
DDWNFVHRLMESEGLYGFWEQDQDGKSHRLVVVDRVDALPALSPRTVRFHHAGTGDEADTFVQFSGTRTLRSVARATRTF
DYKQPPSAANPKATHTPTIANQGDLPPQLEVYEYTGAYTYPEQSRGDHLSKIWMEEQESRAKRFHGVGGVRRMDAGRTFE
LADHAEHDKDDAGQREFAVIETAWVIVNNLPVADEQAVFPHSLQAEVGSIVLATNTGQSRVRHPDGSEGFFQIRVEAQRT
TVPFRSPLEHAKPAMHLQTAIVVAPQGEEVHTDALNRVKVRFHWDRLNDGDEKASCWLRATASDSGNGYGAVHPHRSGEE
VLVDFLGGDCDRPIIVGKVYNGATSPQWHSNGILSGYRSKEYAGAGYNQLVLDDATSQNRVHLYSSQTNAHLHLGYLIDH
TGNNRGSYLGSGFDLRSDAYGAVRANRGLYVTTHPKQPASQPLDVGETQQQLVRAEGLLEAMSDVSAQHQAESLDPGHSA
LKQFTDATQSSASGSASGGRTAAGGTGSANAFKEPVMLFGSPAGIGMSTQQSVQLAADQHVNLVSGQSTHVAAGKSLIAS
VLDRISLFAQNSGIKLFAGKGKVEVQAHADNIELTAQKALKLMAVTESIEGAAAKEILLTSGGAYIRIANGNIEVHAPGK
IDIKGAQHVFSGPTHLSQTMPTLPNSTGNYDQAFIAHWAGTDIPVANTRYQMFSNGKLLSEGVTNAAGETGLTQSHVPHD
VVVKFLGKSNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97264; Mature: 97264

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSALLAGPVQHERLVKLDTPLGPNVLLPHRVIGRSRLGRHFEFTVDTVSVSDNLELKK
CCCCHHHCCCCCCCEEEEECCCCCCCEECCHHHHHHHHCCCEEEEEEEEEEECCCCHHHH
LIAQPVTLWILQADQSYAPHHGYVHCARRLGSDSGVTHYQIVFASFLHFLKFRRDQRIWQ
HHHCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
DQSADDIIADVLNQHPQAKGRFTFKLHQPLPLRSFCMQYEDDWNFVHRLMESEGLYGFWE
CCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHCCCCEEECC
QDQDGKSHRLVVVDRVDALPALSPRTVRFHHAGTGDEADTFVQFSGTRTLRSVARATRTF
CCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHCC
DYKQPPSAANPKATHTPTIANQGDLPPQLEVYEYTGAYTYPEQSRGDHLSKIWMEEQESR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCCCCCHHHHHHHHHHHHH
AKRFHGVGGVRRMDAGRTFELADHAEHDKDDAGQREFAVIETAWVIVNNLPVADEQAVFP
HHHHHCCCCCEECCCCCEEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCC
HSLQAEVGSIVLATNTGQSRVRHPDGSEGFFQIRVEAQRTTVPFRSPLEHAKPAMHLQTA
CHHHHCCCEEEEEECCCCHHCCCCCCCCCEEEEEEEEEECCCCCCCCHHHCCCCEEEEEE
IVVAPQGEEVHTDALNRVKVRFHWDRLNDGDEKASCWLRATASDSGNGYGAVHPHRSGEE
EEECCCCCCHHHHHHCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHH
VLVDFLGGDCDRPIIVGKVYNGATSPQWHSNGILSGYRSKEYAGAGYNQLVLDDATSQNR
HHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCE
VHLYSSQTNAHLHLGYLIDHTGNNRGSYLGSGFDLRSDAYGAVRANRGLYVTTHPKQPAS
EEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCC
QPLDVGETQQQLVRAEGLLEAMSDVSAQHQAESLDPGHSALKQFTDATQSSASGSASGGR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC
TAAGGTGSANAFKEPVMLFGSPAGIGMSTQQSVQLAADQHVNLVSGQSTHVAAGKSLIAS
CCCCCCCCCHHHCCCEEEEECCCCCCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHH
VLDRISLFAQNSGIKLFAGKGKVEVQAHADNIELTAQKALKLMAVTESIEGAAAKEILLT
HHHHHHHHCCCCCEEEEECCCEEEEEEECCCEEEEHHHHHHHHHHHHHHCCHHHHEEEEE
SGGAYIRIANGNIEVHAPGKIDIKGAQHVFSGPTHLSQTMPTLPNSTGNYDQAFIAHWAG
CCCCEEEEECCEEEEECCCEEEECCCHHHHCCCHHHHHHCCCCCCCCCCCCCCEEEEECC
TDIPVANTRYQMFSNGKLLSEGVTNAAGETGLTQSHVPHDVVVKFLGKSNG
CCCCCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MLRSALLAGPVQHERLVKLDTPLGPNVLLPHRVIGRSRLGRHFEFTVDTVSVSDNLELKK
CCCCHHHCCCCCCCEEEEECCCCCCCEECCHHHHHHHHCCCEEEEEEEEEEECCCCHHHH
LIAQPVTLWILQADQSYAPHHGYVHCARRLGSDSGVTHYQIVFASFLHFLKFRRDQRIWQ
HHHCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
DQSADDIIADVLNQHPQAKGRFTFKLHQPLPLRSFCMQYEDDWNFVHRLMESEGLYGFWE
CCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHCCCCEEECC
QDQDGKSHRLVVVDRVDALPALSPRTVRFHHAGTGDEADTFVQFSGTRTLRSVARATRTF
CCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHCC
DYKQPPSAANPKATHTPTIANQGDLPPQLEVYEYTGAYTYPEQSRGDHLSKIWMEEQESR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCCCCCHHHHHHHHHHHHH
AKRFHGVGGVRRMDAGRTFELADHAEHDKDDAGQREFAVIETAWVIVNNLPVADEQAVFP
HHHHHCCCCCEECCCCCEEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCC
HSLQAEVGSIVLATNTGQSRVRHPDGSEGFFQIRVEAQRTTVPFRSPLEHAKPAMHLQTA
CHHHHCCCEEEEEECCCCHHCCCCCCCCCEEEEEEEEEECCCCCCCCHHHCCCCEEEEEE
IVVAPQGEEVHTDALNRVKVRFHWDRLNDGDEKASCWLRATASDSGNGYGAVHPHRSGEE
EEECCCCCCHHHHHHCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHH
VLVDFLGGDCDRPIIVGKVYNGATSPQWHSNGILSGYRSKEYAGAGYNQLVLDDATSQNR
HHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCE
VHLYSSQTNAHLHLGYLIDHTGNNRGSYLGSGFDLRSDAYGAVRANRGLYVTTHPKQPAS
EEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCC
QPLDVGETQQQLVRAEGLLEAMSDVSAQHQAESLDPGHSALKQFTDATQSSASGSASGGR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC
TAAGGTGSANAFKEPVMLFGSPAGIGMSTQQSVQLAADQHVNLVSGQSTHVAAGKSLIAS
CCCCCCCCCHHHCCCEEEEECCCCCCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHH
VLDRISLFAQNSGIKLFAGKGKVEVQAHADNIELTAQKALKLMAVTESIEGAAAKEILLT
HHHHHHHHCCCCCEEEEECCCEEEEEEECCCEEEEHHHHHHHHHHHHHHCCHHHHEEEEE
SGGAYIRIANGNIEVHAPGKIDIKGAQHVFSGPTHLSQTMPTLPNSTGNYDQAFIAHWAG
CCCCEEEEECCEEEEECCCEEEECCCHHHHCCCHHHHHHCCCCCCCCCCCCCCEEEEECC
TDIPVANTRYQMFSNGKLLSEGVTNAAGETGLTQSHVPHDVVVKFLGKSNG
CCCCCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA