| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352557
Identifier: 115352557
GI number: 115352557
Start: 2763760
End: 2764074
Strand: Direct
Name: 115352557
Synonym: Bamb_2506
Alternate gene names: NA
Gene position: 2763760-2764074 (Clockwise)
Preceding gene: 115352556
Following gene: 115352558
Centisome position: 77.71
GC content: 62.86
Gene sequence:
>315_bases ATGAGCACCAAGCAGATCGAAGTCTCGATTCTCGGTCAGCCCTATCGGCTCGCCTGCTCGGCCGAGACCGAAGCCGCGCT GCTCGAGGCCGTCGCGCGCGTCGATGCCGAAATGTCGAAAATCCGCTCGAACAGCTCGGTGCGCGGCACCGATCGCATCG CGGTGATGGCGGCCCTGTCGCTCGCATCCGAATTGCTGCGCCTGCAAACGAGCGTGCGGCACGGTGAAGCATTTCCGGCG GAAGAAATCCGTCGTACAATGCACCAGATGAACGAACAGCTCGGCGCGGTGCTCGCACAGCACGAGACGCAGTAA
Upstream 100 bases:
>100_bases CGCGCACGAAGAGCGCCGAGCAGGCCGACAACCAGCTCGATCTGCTGGATGCGCAGGCGCGCCCGGATAGCGACGACGCG GCCAGCCACGGAGAACATGC
Downstream 100 bases:
>100_bases CGTTTGATCGATGTGTCGATTCCCCTTGATCTCGGCGATCAACGGTGGTCAAATTGGCGCAACGAAACACAGTTCAATCA GCTTCCCTGCCTGGTTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MSTKQIEVSILGQPYRLACSAETEAALLEAVARVDAEMSKIRSNSSVRGTDRIAVMAALSLASELLRLQTSVRHGEAFPA EEIRRTMHQMNEQLGAVLAQHETQ
Sequences:
>Translated_104_residues MSTKQIEVSILGQPYRLACSAETEAALLEAVARVDAEMSKIRSNSSVRGTDRIAVMAALSLASELLRLQTSVRHGEAFPA EEIRRTMHQMNEQLGAVLAQHETQ >Mature_103_residues STKQIEVSILGQPYRLACSAETEAALLEAVARVDAEMSKIRSNSSVRGTDRIAVMAALSLASELLRLQTSVRHGEAFPAE EIRRTMHQMNEQLGAVLAQHETQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11407; Mature: 11276
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKQIEVSILGQPYRLACSAETEAALLEAVARVDAEMSKIRSNSSVRGTDRIAVMAALS CCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LASELLRLQTSVRHGEAFPAEEIRRTMHQMNEQLGAVLAQHETQ HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STKQIEVSILGQPYRLACSAETEAALLEAVARVDAEMSKIRSNSSVRGTDRIAVMAALS CCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LASELLRLQTSVRHGEAFPAEEIRRTMHQMNEQLGAVLAQHETQ HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA