Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352458

Identifier: 115352458

GI number: 115352458

Start: 2655784

End: 2656272

Strand: Direct

Name: 115352458

Synonym: Bamb_2407

Alternate gene names: NA

Gene position: 2655784-2656272 (Clockwise)

Preceding gene: 115352457

Following gene: 115352459

Centisome position: 74.67

GC content: 60.53

Gene sequence:

>489_bases
ATGAGCATTGTTGCGATTTTGAGCAAAGCCAGATCGCTGGGCATACGTCTGAGCGTCGCGGGAGACGTTGTGAAAATGAA
GGGGCCGCCCGATGCGATCGCAGCAATCAAGCCGGAAATCGCTGCGCGCAAGCCGGAGATCATGGCGTACCTGCTCGCCG
CTAGGGACGGTTGTCAACAAATCCCGGCTGACTGCATTGGCGCGCTGTGCTCTTCGGATGGCGGCCTGTACTTGCCGTGG
ATGCCGGTCCTCGGGCCGGAACAGCTGCAATCGATGCAGCGGGAGCTATTCGATGTCGTCGACGAGCTCGCGCGGCTTGA
GCGCTGGCCCGACGATGATTACGACATCGTCATCGGGGCTATCGAGCGCCAACCTCCCTCGACGTTGCGCCCGGATCTTG
CACACTTCCGTGAGCAGCTTCGGGTTGCTCGAATCCAAGCTGAAGCGAGGCAGACGGCAAGCAGGCGAGCATGGAAGTTC
GATCGATGA

Upstream 100 bases:

>100_bases
ACCCATCAAGGGAGTCAACTCCGCAATCACGTCCGCATCCCGTCTCAGACTGCGGACTTGACGGTGATGTCGCGGCGGCG
GCCGAACTGGAGGACGACGT

Downstream 100 bases:

>100_bases
TTGCCATCGGCACACGCTGCGCGAGTCGGCGATGAAAGCGGACCTCGTCAGCTTGACGGCATGGGATCATGAGCGGATGC
AGCAGAGCACCGCTCGGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSIVAILSKARSLGIRLSVAGDVVKMKGPPDAIAAIKPEIAARKPEIMAYLLAARDGCQQIPADCIGALCSSDGGLYLPW
MPVLGPEQLQSMQRELFDVVDELARLERWPDDDYDIVIGAIERQPPSTLRPDLAHFREQLRVARIQAEARQTASRRAWKF
DR

Sequences:

>Translated_162_residues
MSIVAILSKARSLGIRLSVAGDVVKMKGPPDAIAAIKPEIAARKPEIMAYLLAARDGCQQIPADCIGALCSSDGGLYLPW
MPVLGPEQLQSMQRELFDVVDELARLERWPDDDYDIVIGAIERQPPSTLRPDLAHFREQLRVARIQAEARQTASRRAWKF
DR
>Mature_161_residues
SIVAILSKARSLGIRLSVAGDVVKMKGPPDAIAAIKPEIAARKPEIMAYLLAARDGCQQIPADCIGALCSSDGGLYLPWM
PVLGPEQLQSMQRELFDVVDELARLERWPDDDYDIVIGAIERQPPSTLRPDLAHFREQLRVARIQAEARQTASRRAWKFD
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18021; Mature: 17890

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVAILSKARSLGIRLSVAGDVVKMKGPPDAIAAIKPEIAARKPEIMAYLLAARDGCQQ
CHHHHHHHHHHHCCEEEEECCCEEEECCCCHHHHHCCCHHHHCCHHHHHHHHHHHHCHHC
IPADCIGALCSSDGGLYLPWMPVLGPEQLQSMQRELFDVVDELARLERWPDDDYDIVIGA
CCHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
IERQPPSTLRPDLAHFREQLRVARIQAEARQTASRRAWKFDR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SIVAILSKARSLGIRLSVAGDVVKMKGPPDAIAAIKPEIAARKPEIMAYLLAARDGCQQ
HHHHHHHHHHHCCEEEEECCCEEEECCCCHHHHHCCCHHHHCCHHHHHHHHHHHHCHHC
IPADCIGALCSSDGGLYLPWMPVLGPEQLQSMQRELFDVVDELARLERWPDDDYDIVIGA
CCHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
IERQPPSTLRPDLAHFREQLRVARIQAEARQTASRRAWKFDR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA