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The map label for this gene is yhdE [C]

Identifier: 115352389

GI number: 115352389

Start: 2574416

End: 2575102

Strand: Direct

Name: yhdE [C]

Synonym: Bamb_2338

Alternate gene names: 115352389

Gene position: 2574416-2575102 (Clockwise)

Preceding gene: 115352388

Following gene: 115352390

Centisome position: 72.39

GC content: 70.6

Gene sequence:

>687_bases
ATGACGTGCCGTCCTCGGACGCGCGCCGCGCGCGCTCACCGAGATAACGACACCATGCCGTCCAGCACGTCCTCCGCCCT
TTTCCCGCTCCTTTACCTCGCTTCACAAAGCCCACGCCGCCAGGAATTGCTGCAGCAGATCGGCGTGCGCTTCGAGCTGC
TGCTGCCGCGCGCCGACGAGGACGCCGAGGCGCTCGAAGCCGAACTGCCCGGCGAAGCCCCCGACACGTACGTGCGGCGC
GTCACCGTCGCGAAGGCCGAGGCCGCGCGTGCGCGCCTGGTTGCGAGCGGCAAGCCGGCCGCGCCGGTGCTCGTCGCCGA
TACCACGGTGACGATCGACGGCGCGATCCTCGGCAAGCCGGCCGATGCCGACGACGCGCTCGCGATGCTGACCCGCCTCG
CGGGCCGCGAACACGAGGTGCTGACCGCGGTTGCCGTGATCGGCGCCGACGGCGAACTGCTGCCGCCCGCGCTGTCGCGC
TCGTCGGTGCGCTTTTCGGCTGCACCGCGCGACGCCTTCGCGCGCTACGTCGAAACCGGCGAGCCGTTCGGCAAGGCGGG
CGCGTATGCGATCCAGGGGCGCGCCGCCGAATTCATCGAGCGAATCGACGGTTCCCATTCGGGTATCATGGGTCTGCCCC
TTTTTGAGACTGCCGCGTTGCTCCGCACCGCGCGCGTCGCCTTCTGA

Upstream 100 bases:

>100_bases
TCTCCAGCATGACGCTGCCGCACGGGATGGTACGCGTGCTGCTTGCCGAACAGCTTTACCGGGCGTGGAGCATCACGCAG
AATCATCCCTATCATCGCGC

Downstream 100 bases:

>100_bases
ATCCCACCATGAACGAAGAAATCCTGATCAACCTCACGCCCCAGGAAACACGGGTCGCACTCGTCCAGCAAGGCGCGGTG
CAGGAGCTTCACGTCGAGCG

Product: Maf-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTCRPRTRAARAHRDNDTMPSSTSSALFPLLYLASQSPRRQELLQQIGVRFELLLPRADEDAEALEAELPGEAPDTYVRR
VTVAKAEAARARLVASGKPAAPVLVADTTVTIDGAILGKPADADDALAMLTRLAGREHEVLTAVAVIGADGELLPPALSR
SSVRFSAAPRDAFARYVETGEPFGKAGAYAIQGRAAEFIERIDGSHSGIMGLPLFETAALLRTARVAF

Sequences:

>Translated_228_residues
MTCRPRTRAARAHRDNDTMPSSTSSALFPLLYLASQSPRRQELLQQIGVRFELLLPRADEDAEALEAELPGEAPDTYVRR
VTVAKAEAARARLVASGKPAAPVLVADTTVTIDGAILGKPADADDALAMLTRLAGREHEVLTAVAVIGADGELLPPALSR
SSVRFSAAPRDAFARYVETGEPFGKAGAYAIQGRAAEFIERIDGSHSGIMGLPLFETAALLRTARVAF
>Mature_227_residues
TCRPRTRAARAHRDNDTMPSSTSSALFPLLYLASQSPRRQELLQQIGVRFELLLPRADEDAEALEAELPGEAPDTYVRRV
TVAKAEAARARLVASGKPAAPVLVADTTVTIDGAILGKPADADDALAMLTRLAGREHEVLTAVAVIGADGELLPPALSRS
SVRFSAAPRDAFARYVETGEPFGKAGAYAIQGRAAEFIERIDGSHSGIMGLPLFETAALLRTARVAF

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family [H]

Homologues:

Organism=Homo sapiens, GI117553627, Length=189, Percent_Identity=36.5079365079365, Blast_Score=109, Evalue=2e-24,
Organism=Homo sapiens, GI291045183, Length=188, Percent_Identity=31.9148936170213, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI291045181, Length=118, Percent_Identity=39.8305084745763, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI310133124, Length=118, Percent_Identity=39.8305084745763, Blast_Score=89, Evalue=2e-18,
Organism=Escherichia coli, GI1789646, Length=191, Percent_Identity=43.455497382199, Blast_Score=136, Evalue=1e-33,
Organism=Escherichia coli, GI87081830, Length=196, Percent_Identity=27.5510204081633, Blast_Score=72, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193202443, Length=189, Percent_Identity=32.8042328042328, Blast_Score=104, Evalue=3e-23,
Organism=Drosophila melanogaster, GI78706856, Length=185, Percent_Identity=39.4594594594595, Blast_Score=112, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003697 [H]

Pfam domain/function: PF02545 Maf [H]

EC number: NA

Molecular weight: Translated: 24277; Mature: 24146

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCRPRTRAARAHRDNDTMPSSTSSALFPLLYLASQSPRRQELLQQIGVRFELLLPRADE
CCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCC
DAEALEAELPGEAPDTYVRRVTVAKAEAARARLVASGKPAAPVLVADTTVTIDGAILGKP
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEECCEEECCC
ADADDALAMLTRLAGREHEVLTAVAVIGADGELLPPALSRSSVRFSAAPRDAFARYVETG
CCHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCC
EPFGKAGAYAIQGRAAEFIERIDGSHSGIMGLPLFETAALLRTARVAF
CCCCCCCCEEECCHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TCRPRTRAARAHRDNDTMPSSTSSALFPLLYLASQSPRRQELLQQIGVRFELLLPRADE
CCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCC
DAEALEAELPGEAPDTYVRRVTVAKAEAARARLVASGKPAAPVLVADTTVTIDGAILGKP
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEECCEEECCC
ADADDALAMLTRLAGREHEVLTAVAVIGADGELLPPALSRSSVRFSAAPRDAFARYVETG
CCHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCC
EPFGKAGAYAIQGRAAEFIERIDGSHSGIMGLPLFETAALLRTARVAF
CCCCCCCCEEECCHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA