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The map label for this gene is upp

Identifier: 115352382

GI number: 115352382

Start: 2568720

End: 2569370

Strand: Direct

Name: upp

Synonym: Bamb_2331

Alternate gene names: 115352382

Gene position: 2568720-2569370 (Clockwise)

Preceding gene: 115352365

Following gene: 115352383

Centisome position: 72.23

GC content: 66.97

Gene sequence:

>651_bases
ATGAAACAGGACAGCCGTTTCCCGAATCTCTTCATCACCGATCACCCGCTGATCCAGCACAAGCTCACGCACATGCGCGA
CAAGGACACGTCGACGCGCACGTTCCGCGAGCTGCTGCGCGAAATCACGCTGCTGATGGGCTATGAGATCACCCGCAACC
TGCCGATCACGACCAAGCGGGTCGAAACCCCGCTCGTCGCGGTCGACGCACCGGTGATCGCGGGCAAGAAGCTGGCGATC
GTGCCCGTGCTGCGCGCGGGCATCGGGATGTCGGACGGCCTGCTCGACCTGGTCCCGTCCGCGCGGGTCGGCCACATCGG
CGTGTACCGCGCGGAAGATCACCGCCCGGTCGAATACCTGGTGCGCCTGCCGGACCTCGAAGACCGCATCTTCATCCTGT
GCGACCCGATGGTCGCGACCGGCTACTCGGCCGTGCACGCGGTCGACGTGCTCAAGCGCCGCAACGTGCCGGCCGCGAAC
ATCACGTTCGTCGCGCTGGTCGCCGCGCCCGAAGGCGTGCAGGTGTTCCAGGACGCCCACCCGGACGTGAAGCTGTTCGT
CGCGTCGCTCGACTCGCACCTGAACGAGCACGCGTACATCGTGCCGGGCCTGGGCGACGCGGGCGACCGCCTGTTCGGCA
CCAAGAACTGA

Upstream 100 bases:

>100_bases
ATCGCGCGGCGCGCCTTGGTAAAATTGCGGCCATAAGCGGCAGCCGGCTTGCGCCCGCCGCCGCCCCCGATCCCCTTTTG
CCGTTCAAGGCGCCCCCGTC

Downstream 100 bases:

>100_bases
CGCGCCGCGGCCGGACCGACCGGCCGGTGCGCGGCGACGGCCCGCACCGGCCGTTCGGCCATGCGCGGCGGCCCCGAAGC
GACGGTCGCCGCGTGATAAA

Product: uracil phosphoribosyltransferase

Products: NA

Alternate protein names: UMP pyrophosphorylase; UPRTase [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKQDSRFPNLFITDHPLIQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRNLPITTKRVETPLVAVDAPVIAGKKLAI
VPVLRAGIGMSDGLLDLVPSARVGHIGVYRAEDHRPVEYLVRLPDLEDRIFILCDPMVATGYSAVHAVDVLKRRNVPAAN
ITFVALVAAPEGVQVFQDAHPDVKLFVASLDSHLNEHAYIVPGLGDAGDRLFGTKN

Sequences:

>Translated_216_residues
MKQDSRFPNLFITDHPLIQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRNLPITTKRVETPLVAVDAPVIAGKKLAI
VPVLRAGIGMSDGLLDLVPSARVGHIGVYRAEDHRPVEYLVRLPDLEDRIFILCDPMVATGYSAVHAVDVLKRRNVPAAN
ITFVALVAAPEGVQVFQDAHPDVKLFVASLDSHLNEHAYIVPGLGDAGDRLFGTKN
>Mature_216_residues
MKQDSRFPNLFITDHPLIQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRNLPITTKRVETPLVAVDAPVIAGKKLAI
VPVLRAGIGMSDGLLDLVPSARVGHIGVYRAEDHRPVEYLVRLPDLEDRIFILCDPMVATGYSAVHAVDVLKRRNVPAAN
ITFVALVAAPEGVQVFQDAHPDVKLFVASLDSHLNEHAYIVPGLGDAGDRLFGTKN

Specific function: Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate [H]

COG id: COG0035

COG function: function code F; Uracil phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPRTase family [H]

Homologues:

Organism=Homo sapiens, GI57863312, Length=202, Percent_Identity=33.1683168316832, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI301129207, Length=202, Percent_Identity=32.6732673267327, Blast_Score=87, Evalue=1e-17,
Organism=Escherichia coli, GI87082118, Length=203, Percent_Identity=47.7832512315271, Blast_Score=197, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI17539892, Length=212, Percent_Identity=28.7735849056604, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17539894, Length=212, Percent_Identity=28.7735849056604, Blast_Score=81, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6321920, Length=192, Percent_Identity=36.4583333333333, Blast_Score=114, Evalue=2e-26,
Organism=Drosophila melanogaster, GI45550449, Length=222, Percent_Identity=33.7837837837838, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI28573516, Length=222, Percent_Identity=33.7837837837838, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI28573514, Length=222, Percent_Identity=33.7837837837838, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI28573512, Length=222, Percent_Identity=33.7837837837838, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI21358379, Length=171, Percent_Identity=30.4093567251462, Blast_Score=71, Evalue=5e-13,

Paralogues:

None

Copy number: 2580 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005765 [H]

Pfam domain/function: NA

EC number: =2.4.2.9 [H]

Molecular weight: Translated: 23929; Mature: 23929

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQDSRFPNLFITDHPLIQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRNLPITTKR
CCCCCCCCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHCCCCCCCHH
VETPLVAVDAPVIAGKKLAIVPVLRAGIGMSDGLLDLVPSARVGHIGVYRAEDHRPVEYL
CCCCEEEECCCEECCCCEEEHHHHHHCCCCCCCHHHHCCCCCCCEEEEEECCCCCCHHHE
VRLPDLEDRIFILCDPMVATGYSAVHAVDVLKRRNVPAANITFVALVAAPEGVQVFQDAH
EECCCCCCCEEEEECCHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHCCC
PDVKLFVASLDSHLNEHAYIVPGLGDAGDRLFGTKN
CCCEEHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MKQDSRFPNLFITDHPLIQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRNLPITTKR
CCCCCCCCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHCCCCCCCHH
VETPLVAVDAPVIAGKKLAIVPVLRAGIGMSDGLLDLVPSARVGHIGVYRAEDHRPVEYL
CCCCEEEECCCEECCCCEEEHHHHHHCCCCCCCHHHHCCCCCCCEEEEEECCCCCCHHHE
VRLPDLEDRIFILCDPMVATGYSAVHAVDVLKRRNVPAANITFVALVAAPEGVQVFQDAH
EECCCCCCCEEEEECCHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHCCC
PDVKLFVASLDSHLNEHAYIVPGLGDAGDRLFGTKN
CCCEEHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA