Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352356

Identifier: 115352356

GI number: 115352356

Start: 2542120

End: 2542560

Strand: Direct

Name: 115352356

Synonym: Bamb_2305

Alternate gene names: NA

Gene position: 2542120-2542560 (Clockwise)

Preceding gene: 115352355

Following gene: 115352357

Centisome position: 71.48

GC content: 71.88

Gene sequence:

>441_bases
ATGAGCTCCGCTCCCGTAAATCGAGAATACGAATTCGCGCTGAAGGTCCGCCGCGCGCTGGACGAACGTGCCGCGGCGCT
GCCTGCCGCGACCACCGACCGTCTGGCCGTCGCGCGCCGGGCCGCGCTCGCGCGCAAGAAGCCGGAACCCGCGAGCGCGC
CGGTGTTCGTGCCCGCCTTCGCCGGTGCGGCCGGCGCATACGGCATGCCGCCCGCGAGCCATCCGCAGGCCAGCCGCCCG
TCCGCGTCGCTCGCGCGCCGCCTGCTGCGCGCGTGGCCGCTCGCGCTGCTGCTGGCGGGGCTCGTCGGCATCGCCTACTG
GGAAGACATGCAGCGCACCGCCGAGCTCGCCGACATCGACGCGGCGATGCTCAGTGACGACCTGCCGCTCAACGCGTATC
TCGATCACGGGTTCAACGCGTATCTTTCGCACGCACGCTAA

Upstream 100 bases:

>100_bases
CTGCCGCCGCAATGGGGTGCTCCGAAGGCAGCGTCAAGACGCACTGCTCGCGAGCCACTCATACCCTGGCACACGCGCTC
AAGGCCAAAGGAATCACGCT

Downstream 100 bases:

>100_bases
CAGACAATAACGAGGGGATCGCACGGGTGAATCAGAAACGCGGCCTGGCCGTATTTTTCGGATGCGTGATCGCGATCGCC
GTTTCCTACGTCGCCACCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSSAPVNREYEFALKVRRALDERAAALPAATTDRLAVARRAALARKKPEPASAPVFVPAFAGAAGAYGMPPASHPQASRP
SASLARRLLRAWPLALLLAGLVGIAYWEDMQRTAELADIDAAMLSDDLPLNAYLDHGFNAYLSHAR

Sequences:

>Translated_146_residues
MSSAPVNREYEFALKVRRALDERAAALPAATTDRLAVARRAALARKKPEPASAPVFVPAFAGAAGAYGMPPASHPQASRP
SASLARRLLRAWPLALLLAGLVGIAYWEDMQRTAELADIDAAMLSDDLPLNAYLDHGFNAYLSHAR
>Mature_145_residues
SSAPVNREYEFALKVRRALDERAAALPAATTDRLAVARRAALARKKPEPASAPVFVPAFAGAAGAYGMPPASHPQASRPS
ASLARRLLRAWPLALLLAGLVGIAYWEDMQRTAELADIDAAMLSDDLPLNAYLDHGFNAYLSHAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15650; Mature: 15519

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAPVNREYEFALKVRRALDERAAALPAATTDRLAVARRAALARKKPEPASAPVFVPAF
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHH
AGAAGAYGMPPASHPQASRPSASLARRLLRAWPLALLLAGLVGIAYWEDMQRTAELADID
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAMLSDDLPLNAYLDHGFNAYLSHAR
HHHHCCCCCCHHHHHCCHHHHHCCCC
>Mature Secondary Structure 
SSAPVNREYEFALKVRRALDERAAALPAATTDRLAVARRAALARKKPEPASAPVFVPAF
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHH
AGAAGAYGMPPASHPQASRPSASLARRLLRAWPLALLLAGLVGIAYWEDMQRTAELADID
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAMLSDDLPLNAYLDHGFNAYLSHAR
HHHHCCCCCCHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA