Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

Click here to switch to the map view.

The map label for this gene is 115352294

Identifier: 115352294

GI number: 115352294

Start: 2475804

End: 2476049

Strand: Direct

Name: 115352294

Synonym: Bamb_2243

Alternate gene names: NA

Gene position: 2475804-2476049 (Clockwise)

Preceding gene: 115352293

Following gene: 115352300

Centisome position: 69.61

GC content: 65.04

Gene sequence:

>246_bases
ATGACCGACACCACGCGCCCGACCACGCTGACCTTGCGCCGCACGACCGGCACCGCAAGCGGCAACCGTCAGAAGACGGC
AGCGGTCACGACGCCGGCGAAACCCGCCGGAAGCCGCGATGCCGGCACACGGACCCTCAGCAGCGATGCGCTGCTGCAAG
GTCACAGCCACATCAGCATCGCGCATAACGGAGAGACTTATCAGTTGCGTGCCACGCGGCTCGGCAAACTGATCCTGACG
AAGTAA

Upstream 100 bases:

>100_bases
CTATCGGGGTTGTTGCATCGATCGATAAAGAGTTTTTGTAAATGGGAATAGTTATCATTTAGAATTCATTCCATCGCATC
GACTGTTACCGATCAACCGA

Downstream 100 bases:

>100_bases
CGACAGAGTATTGTGGGGACCACCTCCCTGAGAGGTGTTGGGCAGTAGCCAGCGTAACGGCTTGCACGCGAGATCTAGAC
CCCTTCGTGCAAATACACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MTDTTRPTTLTLRRTTGTASGNRQKTAAVTTPAKPAGSRDAGTRTLSSDALLQGHSHISIAHNGETYQLRATRLGKLILT
K

Sequences:

>Translated_81_residues
MTDTTRPTTLTLRRTTGTASGNRQKTAAVTTPAKPAGSRDAGTRTLSSDALLQGHSHISIAHNGETYQLRATRLGKLILT
K
>Mature_80_residues
TDTTRPTTLTLRRTTGTASGNRQKTAAVTTPAKPAGSRDAGTRTLSSDALLQGHSHISIAHNGETYQLRATRLGKLILTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8602; Mature: 8471

Theoretical pI: Translated: 12.08; Mature: 12.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTTRPTTLTLRRTTGTASGNRQKTAAVTTPAKPAGSRDAGTRTLSSDALLQGHSHISI
CCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCEECCCCEEEE
AHNGETYQLRATRLGKLILTK
EECCCEEEEEECCCCEEEECC
>Mature Secondary Structure 
TDTTRPTTLTLRRTTGTASGNRQKTAAVTTPAKPAGSRDAGTRTLSSDALLQGHSHISI
CCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCEECCCCEEEE
AHNGETYQLRATRLGKLILTK
EECCCEEEEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA