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The map label for this gene is ycfJ [C]

Identifier: 115352207

GI number: 115352207

Start: 2369855

End: 2370610

Strand: Direct

Name: ycfJ [C]

Synonym: Bamb_2156

Alternate gene names: 115352207

Gene position: 2369855-2370610 (Clockwise)

Preceding gene: 115352206

Following gene: 115352220

Centisome position: 66.63

GC content: 70.77

Gene sequence:

>756_bases
ATGGACAACCAGAATCAGACCACGCCGCAAAAACAACGCCTCCACCCGCTGATCGCGACCGCGGCAGGCGCCGTCATCGT
CGCCAGCCTCGCCGCCACCGCGGCGATCACGGGCATCTTCCCGAAGGCCAGCAGCAACAACGCGCAGAACGGCCAGACCC
AGGCCGCGCTGATCGCGTCGCAGCCGGCCGTCGATACGGCCGCGGCAGCCAGTGCCGCGCTGGCCGCGCAAGCGCAGCAG
CAGGCAGCCGAACAGGCCGCGCAGCAGAAGGCTGAGCAAAAGGCGGCGGCCGAGAAGGCCGCGGCGGCACAAGCCGAACC
GAAGCCCGCGCCGCGCCCGGCAGCCACGCACCGCCGCCATACGCCGGCACCGCAACCGCCGCAATATGCGCAACAGCAGT
CCGCGCCCGCTCAAGCGGCCTATTGCCAGAGCTGCGGCACGATCGTCTCGATCACGCAATCGCGCACGCCGGGCCAGAGC
TCGGGGATCGGCGCGGTCGGCGGCGCAGCAGCCGGCGGCCTGCTCGGCAACCAGTTCGGTCACGGCAATGGCCGCACCGC
GATGACCATCATCGGCGCGCTCGGCGGCGGTCTTGCCGGCAACCAGGTCGAGAAGCAGGTGCGCGCGGAAACCGACTACC
AGGTGCAGGTCCAGATGGAAAGCGGCGCGACGCGTACGTTCACGTACCACAGCCCGCCGCCGTTCGGCCAGGGTCAGCGC
GTGCGGATCGAGAACGGCACGCTGGTCGGCGCGTAA

Upstream 100 bases:

>100_bases
GGACCAGAACGCGGCGCCGGAACGCCAAGTCTGCTCGCTCCCGAAGCGTGGGATCCGGCCAGCGCCAATGTGCGGAGCCG
GATCGACACCGGAGAAAAAC

Downstream 100 bases:

>100_bases
TGCGTAACGCATGACGAATCGCCGCGCGGCCGTTGTGCCGCGCCGGAAATGAAAAAGGCTCGTGACAGCATCACGAGCCT
TTTCTTTTTGCGGGAGCGGC

Product: 17 kDa surface antigen

Products: NA

Alternate protein names: Outer Membrane Lipoprotein

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MDNQNQTTPQKQRLHPLIATAAGAVIVASLAATAAITGIFPKASSNNAQNGQTQAALIASQPAVDTAAAASAALAAQAQQ
QAAEQAAQQKAEQKAAAEKAAAAQAEPKPAPRPAATHRRHTPAPQPPQYAQQQSAPAQAAYCQSCGTIVSITQSRTPGQS
SGIGAVGGAAAGGLLGNQFGHGNGRTAMTIIGALGGGLAGNQVEKQVRAETDYQVQVQMESGATRTFTYHSPPPFGQGQR
VRIENGTLVGA

Sequences:

>Translated_251_residues
MDNQNQTTPQKQRLHPLIATAAGAVIVASLAATAAITGIFPKASSNNAQNGQTQAALIASQPAVDTAAAASAALAAQAQQ
QAAEQAAQQKAEQKAAAEKAAAAQAEPKPAPRPAATHRRHTPAPQPPQYAQQQSAPAQAAYCQSCGTIVSITQSRTPGQS
SGIGAVGGAAAGGLLGNQFGHGNGRTAMTIIGALGGGLAGNQVEKQVRAETDYQVQVQMESGATRTFTYHSPPPFGQGQR
VRIENGTLVGA
>Mature_251_residues
MDNQNQTTPQKQRLHPLIATAAGAVIVASLAATAAITGIFPKASSNNAQNGQTQAALIASQPAVDTAAAASAALAAQAQQ
QAAEQAAQQKAEQKAAAEKAAAAQAEPKPAPRPAATHRRHTPAPQPPQYAQQQSAPAQAAYCQSCGTIVSITQSRTPGQS
SGIGAVGGAAAGGLLGNQFGHGNGRTAMTIIGALGGGLAGNQVEKQVRAETDYQVQVQMESGATRTFTYHSPPPFGQGQR
VRIENGTLVGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25343; Mature: 25343

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNQNQTTPQKQRLHPLIATAAGAVIVASLAATAAITGIFPKASSNNAQNGQTQAALIAS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC
QPAVDTAAAASAALAAQAQQQAAEQAAQQKAEQKAAAEKAAAAQAEPKPAPRPAATHRRH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
TPAPQPPQYAQQQSAPAQAAYCQSCGTIVSITQSRTPGQSSGIGAVGGAAAGGLLGNQFG
CCCCCCHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHCCHHCCCCC
HGNGRTAMTIIGALGGGLAGNQVEKQVRAETDYQVQVQMESGATRTFTYHSPPPFGQGQR
CCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCCE
VRIENGTLVGA
EEEECCEEECC
>Mature Secondary Structure
MDNQNQTTPQKQRLHPLIATAAGAVIVASLAATAAITGIFPKASSNNAQNGQTQAALIAS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC
QPAVDTAAAASAALAAQAQQQAAEQAAQQKAEQKAAAEKAAAAQAEPKPAPRPAATHRRH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
TPAPQPPQYAQQQSAPAQAAYCQSCGTIVSITQSRTPGQSSGIGAVGGAAAGGLLGNQFG
CCCCCCHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHCCHHCCCCC
HGNGRTAMTIIGALGGGLAGNQVEKQVRAETDYQVQVQMESGATRTFTYHSPPPFGQGQR
CCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCCE
VRIENGTLVGA
EEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA