Click here to switch to the map view.

The map label for this gene is 115352048

Identifier: 115352048

GI number: 115352048

Start: 2193645

End: 2193896

Strand: Direct

Name: 115352048

Synonym: Bamb_1997

Alternate gene names: NA

Gene position: 2193645-2193896 (Clockwise)

Preceding gene: 115352047

Following gene: 115352049

Centisome position: 61.68

GC content: 59.92

Gene sequence:

>252_bases
TTGCTGCTATCACGGGCCTGGAGCATCGCCCAGTGGCAGACGGGCAGCGCGTGGTCGGGCATCTACCGGCGCTCGAACAT
GCTGGCGAGCGGACGCTACGCGATGTTCGATGACGGCATGGGATTCAGTTTGATGCCGTGGCGGCCAGTTATTGAACAGT
GGTTGGGACAGAAGATCGCCGCGACGGTGCGCGGGGGGAGCGTCATGAAAAAGATTGGGCGGCAGTTCGGAAAACCACAT
GATTTCCATTAG

Upstream 100 bases:

>100_bases
CCAGCAACGCCAGGGCCGGGCGGGCGCGCTCGGTGAAGGCGAGGCCCTCCGCAGTGATGCGCAGGTGTCGCGTTTTTGCG
CTTGAAAGCAGCGAAGGACA

Downstream 100 bases:

>100_bases
GAAACCATATTGGGTACAATCGCCGTGACTTCACTCGTATCAAGTTGTATTTGAGAAACTTGTAGGAATTTCATGACCAC
TATTCCAGCCAACGAAGACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MLLSRAWSIAQWQTGSAWSGIYRRSNMLASGRYAMFDDGMGFSLMPWRPVIEQWLGQKIAATVRGGSVMKKIGRQFGKPH
DFH

Sequences:

>Translated_83_residues
MLLSRAWSIAQWQTGSAWSGIYRRSNMLASGRYAMFDDGMGFSLMPWRPVIEQWLGQKIAATVRGGSVMKKIGRQFGKPH
DFH
>Mature_83_residues
MLLSRAWSIAQWQTGSAWSGIYRRSNMLASGRYAMFDDGMGFSLMPWRPVIEQWLGQKIAATVRGGSVMKKIGRQFGKPH
DFH

Specific function: Unknown

COG id: COG3843

COG function: function code U; Type IV secretory pathway, VirD2 components (relaxase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9448; Mature: 9448

Theoretical pI: Translated: 11.54; Mature: 11.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.2 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSRAWSIAQWQTGSAWSGIYRRSNMLASGRYAMFDDGMGFSLMPWRPVIEQWLGQKIA
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCHHHH
ATVRGGSVMKKIGRQFGKPHDFH
HHHCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLLSRAWSIAQWQTGSAWSGIYRRSNMLASGRYAMFDDGMGFSLMPWRPVIEQWLGQKIA
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCHHHH
ATVRGGSVMKKIGRQFGKPHDFH
HHHCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA