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The map label for this gene is 115352039

Identifier: 115352039

GI number: 115352039

Start: 2183996

End: 2184583

Strand: Direct

Name: 115352039

Synonym: Bamb_1988

Alternate gene names: NA

Gene position: 2183996-2184583 (Clockwise)

Preceding gene: 115352038

Following gene: 115352040

Centisome position: 61.41

GC content: 67.86

Gene sequence:

>588_bases
ATGACGATCGTTTCCACTTCATCCGCCTCGCCGCGTCCTCGCTCACGCCTGCGCGCTCGTCTCGTGCTGGCGGCCCTGAC
CGCCTGCGGCCTCGCTGCGCTGGCCTGGGCGGCTTTCGTGTCGCCGCTACCTCGCCTGACGTACAACCCATCCGACAGCG
TGGCGGTCGGCTGGTATCGCATCGAACCGTTCGACCCGCGCACCGCCACGCTGCCACGTCCGTTGTCCGTGGACAGCATC
GTGTTGATGCCCCTGCCAGCCGACGTCGCGGCACTCGCTGCGCAGCGCGGCTATCTGCCGACGCACGTTCCGCTGCTCAA
ACGTGTGGGCGCGGTCGCACCGCAACACGTTTGCAACTTCGCTGGTCAGGTTCGCATCGACGGCGTGCCTTCGGCCGCCG
CACTGCCTGCCGACCAGCTGGGCCGGCCGCTGCCATCCTTGCAGCTTTGCCGGCGCCTCGCGCCTGGCGAACTGTTCTTG
TTGAGCGCAACGAATCCGGCGTCTTTCGACAGCCGGTATTTCGGCCCGGTCAACGCTGCTACCGTGATCGGCGTTGCGCA
CCCCGTTTGGCTGGAGGCACGCCCGTGA

Upstream 100 bases:

>100_bases
CGTACTGGCGCACGCTGGGCAACCGTATCGCGGCGCGCTTGCCGCTGCCCGAATACACCGCCGAGCGGCACGCCGCCTGG
CTCGCTGGGAAGGTTCTGCC

Downstream 100 bases:

>100_bases
TGGCCGCCGATTCGCTGCCCGTTGCCGCGCATCTCATCGTGCCATCGGGCATGTCGTTCCGGCTGCGGCTGCCGTGTCGT
CGCGCGTGCAGTGCGAGCGC

Product: Type IV secretory pathway protease TraF-like protein

Products: NA

Alternate protein names: Conjugal Transfer Protein TraF; TraF Peptidase; Conjugal Transfer TRAF Transmembrane Protein; Type IV Secretory Pathway Protease TraF-Like Protein; Peptidase; Type IV Secretory Pathway Protease TraF; Conjugative Transfer Signal Peptidase TraF; Plasmid Transfer Protein TraF; Peptidase S; Raf Peptidase. Serine Peptidase. Merops Family; Conjugal Transfer Protein Traf; Conjugal Transfer TraF Transmembrane Protein; Plasmid Transfer Protein Traf; Traf Peptidase Serine Peptidase Merops Family; Transmembrane Anchor Conjugal Transfer Protein; RaF Peptidase. Serine Peptidase. MEROPS Family; TraF Peptidase Serine Peptidase MEROPS Family

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MTIVSTSSASPRPRSRLRARLVLAALTACGLAALAWAAFVSPLPRLTYNPSDSVAVGWYRIEPFDPRTATLPRPLSVDSI
VLMPLPADVAALAAQRGYLPTHVPLLKRVGAVAPQHVCNFAGQVRIDGVPSAAALPADQLGRPLPSLQLCRRLAPGELFL
LSATNPASFDSRYFGPVNAATVIGVAHPVWLEARP

Sequences:

>Translated_195_residues
MTIVSTSSASPRPRSRLRARLVLAALTACGLAALAWAAFVSPLPRLTYNPSDSVAVGWYRIEPFDPRTATLPRPLSVDSI
VLMPLPADVAALAAQRGYLPTHVPLLKRVGAVAPQHVCNFAGQVRIDGVPSAAALPADQLGRPLPSLQLCRRLAPGELFL
LSATNPASFDSRYFGPVNAATVIGVAHPVWLEARP
>Mature_194_residues
TIVSTSSASPRPRSRLRARLVLAALTACGLAALAWAAFVSPLPRLTYNPSDSVAVGWYRIEPFDPRTATLPRPLSVDSIV
LMPLPADVAALAAQRGYLPTHVPLLKRVGAVAPQHVCNFAGQVRIDGVPSAAALPADQLGRPLPSLQLCRRLAPGELFLL
SATNPASFDSRYFGPVNAATVIGVAHPVWLEARP

Specific function: Unknown

COG id: COG4959

COG function: function code OU; Type IV secretory pathway, protease TraF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20685; Mature: 20554

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIVSTSSASPRPRSRLRARLVLAALTACGLAALAWAAFVSPLPRLTYNPSDSVAVGWYR
CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEEE
IEPFDPRTATLPRPLSVDSIVLMPLPADVAALAAQRGYLPTHVPLLKRVGAVAPQHVCNF
ECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHCC
AGQVRIDGVPSAAALPADQLGRPLPSLQLCRRLAPGELFLLSATNPASFDSRYFGPVNAA
CCEEEECCCCCCCCCCHHHHCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHH
TVIGVAHPVWLEARP
HEEECCCCEEEECCC
>Mature Secondary Structure 
TIVSTSSASPRPRSRLRARLVLAALTACGLAALAWAAFVSPLPRLTYNPSDSVAVGWYR
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEEE
IEPFDPRTATLPRPLSVDSIVLMPLPADVAALAAQRGYLPTHVPLLKRVGAVAPQHVCNF
ECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHCC
AGQVRIDGVPSAAALPADQLGRPLPSLQLCRRLAPGELFLLSATNPASFDSRYFGPVNAA
CCEEEECCCCCCCCCCHHHHCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHH
TVIGVAHPVWLEARP
HEEECCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA