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The map label for this gene is yubP [H]

Identifier: 115352024

GI number: 115352024

Start: 2170913

End: 2171737

Strand: Direct

Name: yubP [H]

Synonym: Bamb_1973

Alternate gene names: 115352024

Gene position: 2170913-2171737 (Clockwise)

Preceding gene: 115352015

Following gene: 115352034

Centisome position: 61.04

GC content: 64.61

Gene sequence:

>825_bases
ATGCAACTTGCTTCCCGCTTCGCTTCCCGTTCGCCGGTGCTGCGCTCAGAACGTCCTTTGTCGGATGACCAAATCCGCGC
CGTGGCTCCGTCCATCTTTGCGGACGCCCCGCACGAAAGCCGATCGGACCGTTACAGCTACATCCCCACCGCCACCGTGC
TGCAAGAGCTGCGAGGGGAAGGCTTCGAGCCTTTCATGGTGTGCCAGACCCGCGTGCGCAACGACGACCGCCGCGACTAC
ACCAAGCACATGATCCGGCTGCGCCATGCCAGCCAGATCAACGGCCGTGAGGCCAACGAAATCATCCTGCTGAACTCGCA
TGACGGCACCAGCAGCTATCAGATGCTCGCTGGAATGTTCCGCTTCGTGTGCCAAAACGGCCTGGTCTGCGGCGACACCG
TGGCGGACGTGCGCATACCCCACAAGGGCGACGTGGCCGCGCATGTTATCGAAGGCGCTTACGAAGTCCTGCACGGCTTC
GACCGGGCGCAGGAATCCCGCGACGCCATGCAGGCCATCGCACTCGACACGGGTGAATCGGAAGTGTTCGCCCGCGCCGC
GCTGGCGTTGAAGTACGACGAGGACAAGCCCGCGCCCATCACGGAAAGCCAAATCCTGATGCCGCGCCGCACGGACGACA
GCCGCCGCGACCTGTGGAGCGTATTCAACCGCACGCAGGAAAACCTCGTCAAAGGCGGACTGCCCGCCCGCGCTGCGAAC
GGTCGCCGCCAGACCACCCGACCCGTGCAGGGCATCGACAACGGCATCCGCCTGAATCGCGCCCTGTGGCTGCTGGCCGA
TGGCCTGCGCCAGTTGAAAGCCTGA

Upstream 100 bases:

>100_bases
GTTCTTCGTGCCGACCGCACCGAACAGCCGAAAGGCTGGGCTCCGAATCTAGGAATCCGGTGAGGTTTCTTCAACAGCCA
ACTTTGTCAGGAGAAAGACC

Downstream 100 bases:

>100_bases
ACCCCACGCGGCAGGGGCAGGCAGCAGCCCTTACCGCTTCTCTCGCTGCTGCATCCCTGAATAGATAGGCGTTATCACTA
TGAACGCCAATGCCCAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MQLASRFASRSPVLRSERPLSDDQIRAVAPSIFADAPHESRSDRYSYIPTATVLQELRGEGFEPFMVCQTRVRNDDRRDY
TKHMIRLRHASQINGREANEIILLNSHDGTSSYQMLAGMFRFVCQNGLVCGDTVADVRIPHKGDVAAHVIEGAYEVLHGF
DRAQESRDAMQAIALDTGESEVFARAALALKYDEDKPAPITESQILMPRRTDDSRRDLWSVFNRTQENLVKGGLPARAAN
GRRQTTRPVQGIDNGIRLNRALWLLADGLRQLKA

Sequences:

>Translated_274_residues
MQLASRFASRSPVLRSERPLSDDQIRAVAPSIFADAPHESRSDRYSYIPTATVLQELRGEGFEPFMVCQTRVRNDDRRDY
TKHMIRLRHASQINGREANEIILLNSHDGTSSYQMLAGMFRFVCQNGLVCGDTVADVRIPHKGDVAAHVIEGAYEVLHGF
DRAQESRDAMQAIALDTGESEVFARAALALKYDEDKPAPITESQILMPRRTDDSRRDLWSVFNRTQENLVKGGLPARAAN
GRRQTTRPVQGIDNGIRLNRALWLLADGLRQLKA
>Mature_274_residues
MQLASRFASRSPVLRSERPLSDDQIRAVAPSIFADAPHESRSDRYSYIPTATVLQELRGEGFEPFMVCQTRVRNDDRRDY
TKHMIRLRHASQINGREANEIILLNSHDGTSSYQMLAGMFRFVCQNGLVCGDTVADVRIPHKGDVAAHVIEGAYEVLHGF
DRAQESRDAMQAIALDTGESEVFARAALALKYDEDKPAPITESQILMPRRTDDSRRDLWSVFNRTQENLVKGGLPARAAN
GRRQTTRPVQGIDNGIRLNRALWLLADGLRQLKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0380 family [H]

Homologues:

Organism=Escherichia coli, GI1788987, Length=268, Percent_Identity=56.7164179104478, Blast_Score=322, Evalue=2e-89,
Organism=Escherichia coli, GI87081705, Length=268, Percent_Identity=56.7164179104478, Blast_Score=312, Evalue=2e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009276 [H]

Pfam domain/function: PF06067 DUF932 [H]

EC number: NA

Molecular weight: Translated: 30801; Mature: 30801

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLASRFASRSPVLRSERPLSDDQIRAVAPSIFADAPHESRSDRYSYIPTATVLQELRGE
CCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC
GFEPFMVCQTRVRNDDRRDYTKHMIRLRHASQINGREANEIILLNSHDGTSSYQMLAGMF
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHH
RFVCQNGLVCGDTVADVRIPHKGDVAAHVIEGAYEVLHGFDRAQESRDAMQAIALDTGES
HHHHHCCCEECCCHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EVFARAALALKYDEDKPAPITESQILMPRRTDDSRRDLWSVFNRTQENLVKGGLPARAAN
HHHHHHHHHEEECCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GRRQTTRPVQGIDNGIRLNRALWLLADGLRQLKA
CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQLASRFASRSPVLRSERPLSDDQIRAVAPSIFADAPHESRSDRYSYIPTATVLQELRGE
CCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC
GFEPFMVCQTRVRNDDRRDYTKHMIRLRHASQINGREANEIILLNSHDGTSSYQMLAGMF
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHH
RFVCQNGLVCGDTVADVRIPHKGDVAAHVIEGAYEVLHGFDRAQESRDAMQAIALDTGES
HHHHHCCCEECCCHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EVFARAALALKYDEDKPAPITESQILMPRRTDDSRRDLWSVFNRTQENLVKGGLPARAAN
HHHHHHHHHEEECCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GRRQTTRPVQGIDNGIRLNRALWLLADGLRQLKA
CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2693941; 2315017 [H]