| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is mtfA [H]
Identifier: 115351821
GI number: 115351821
Start: 1957330
End: 1958160
Strand: Direct
Name: mtfA [H]
Synonym: Bamb_1770
Alternate gene names: 115351821
Gene position: 1957330-1958160 (Clockwise)
Preceding gene: 115351820
Following gene: 115351822
Centisome position: 55.03
GC content: 67.15
Gene sequence:
>831_bases ATGCTTTCGAAACTGACCCGCTGGTTCGACGACCGCCGCCGCGACCGCGCGCTGCGCAGCCATCCGATTGCCGATGCGTT GTGGCAGGACACCGTGGCGCGCCTGCCGTTTCTCGACGCGCTGCTGCCCAGCGACCTGGGCCGGTTGCGCGAACTCACGA GCCTGTTCATCGCGAAGAAGTCGTTTTCGACCGCGCACGGGCTCGAGCTGACCGACGAGATGATCGTCGCGATCGCCGCG CAGGCATGCCTGCCCGTGCTGAATCTGGATTTGTCGCTGTACGACGGCTGGGTCGGCGTCGTCGTGTATCCGGGCGAATT CGTGATCCGCAAGACCGTGCAGGACGAGGACGGCGTCGTGCATGAAGTCGAGCAGGACGCGAGCGGCGAGGCGTGGGAAG GCGGCCCCGTGATCCTGTCGTGGGAAGACGCGCAGATGACGGACGGCCGCGACGCGTACAACGTCGTGATCCACGAGTTC GCGCACAAGATCGACATGGTCAACGGCGAGGCCGACGGCTATCCGCCCCTTTTTCGCCGGTGGCACGCGCCGCACCTCGA CGCGCAGGCCTGGGCCGACGTGTTCGAGCATGCGTACGACCAGTTCTGCGCACGCGTCGATGCGGTGCCGGACCGTGCGT GGGCGCGCTTCGAGCGGGAATCGCTGATCGATCCGTATGCGGCCGACCACCCGTCGGAATTCTTCGCGGTGTGCAGCGAA GCGCTGTTCGTGCGGCCACGCGCGTTCGAGTCCGAATTTCCGGAGCTGTACCGGCTGCTGGCGCGTTACTACCGGCAGGA TCCGGCCCGCACGGGCGCCCTCGGCGCGTGA
Upstream 100 bases:
>100_bases TTCCTCGCGGGCGTCGCGCTCGTCGGCGGCCTCTTCGCGGCATGGCAAAAAGAGATCGATTGAGTTAAAAGACAGGCTTT GGATCTTCCGCGCTGCCTCC
Downstream 100 bases:
>100_bases TGAAAATTATTCGTCAACCATCTGATTTTCTGGCATAATCGCCGTTTTTCGACCTTAGGCAAGTGGCTCGCGCCGGGCTT GGCGTCGTCTGGCAGCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Mlc titration factor A [H]
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MLSKLTRWFDDRRRDRALRSHPIADALWQDTVARLPFLDALLPSDLGRLRELTSLFIAKKSFSTAHGLELTDEMIVAIAA QACLPVLNLDLSLYDGWVGVVVYPGEFVIRKTVQDEDGVVHEVEQDASGEAWEGGPVILSWEDAQMTDGRDAYNVVIHEF AHKIDMVNGEADGYPPLFRRWHAPHLDAQAWADVFEHAYDQFCARVDAVPDRAWARFERESLIDPYAADHPSEFFAVCSE ALFVRPRAFESEFPELYRLLARYYRQDPARTGALGA
Sequences:
>Translated_276_residues MLSKLTRWFDDRRRDRALRSHPIADALWQDTVARLPFLDALLPSDLGRLRELTSLFIAKKSFSTAHGLELTDEMIVAIAA QACLPVLNLDLSLYDGWVGVVVYPGEFVIRKTVQDEDGVVHEVEQDASGEAWEGGPVILSWEDAQMTDGRDAYNVVIHEF AHKIDMVNGEADGYPPLFRRWHAPHLDAQAWADVFEHAYDQFCARVDAVPDRAWARFERESLIDPYAADHPSEFFAVCSE ALFVRPRAFESEFPELYRLLARYYRQDPARTGALGA >Mature_276_residues MLSKLTRWFDDRRRDRALRSHPIADALWQDTVARLPFLDALLPSDLGRLRELTSLFIAKKSFSTAHGLELTDEMIVAIAA QACLPVLNLDLSLYDGWVGVVVYPGEFVIRKTVQDEDGVVHEVEQDASGEAWEGGPVILSWEDAQMTDGRDAYNVVIHEF AHKIDMVNGEADGYPPLFRRWHAPHLDAQAWADVFEHAYDQFCARVDAVPDRAWARFERESLIDPYAADHPSEFFAVCSE ALFVRPRAFESEFPELYRLLARYYRQDPARTGALGA
Specific function: Involved in the regulation of ptsG expression by binding and inactivating mlc [H]
COG id: COG3228
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mtfA family [H]
Homologues:
Organism=Escherichia coli, GI87082014, Length=244, Percent_Identity=33.1967213114754, Blast_Score=136, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010384 [H]
Pfam domain/function: PF06167 DUF980 [H]
EC number: NA
Molecular weight: Translated: 31381; Mature: 31381
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSKLTRWFDDRRRDRALRSHPIADALWQDTVARLPFLDALLPSDLGRLRELTSLFIAKK CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFSTAHGLELTDEMIVAIAAQACLPVLNLDLSLYDGWVGVVVYPGEFVIRKTVQDEDGVV HCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEEECCCEEEEECCCCCCCHH HEVEQDASGEAWEGGPVILSWEDAQMTDGRDAYNVVIHEFAHKIDMVNGEADGYPPLFRR HHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH WHAPHLDAQAWADVFEHAYDQFCARVDAVPDRAWARFERESLIDPYAADHPSEFFAVCSE CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH ALFVRPRAFESEFPELYRLLARYYRQDPARTGALGA HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLSKLTRWFDDRRRDRALRSHPIADALWQDTVARLPFLDALLPSDLGRLRELTSLFIAKK CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFSTAHGLELTDEMIVAIAAQACLPVLNLDLSLYDGWVGVVVYPGEFVIRKTVQDEDGVV HCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEEECCCEEEEECCCCCCCHH HEVEQDASGEAWEGGPVILSWEDAQMTDGRDAYNVVIHEFAHKIDMVNGEADGYPPLFRR HHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH WHAPHLDAQAWADVFEHAYDQFCARVDAVPDRAWARFERESLIDPYAADHPSEFFAVCSE CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH ALFVRPRAFESEFPELYRLLARYYRQDPARTGALGA HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA