Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351745

Identifier: 115351745

GI number: 115351745

Start: 1875379

End: 1876491

Strand: Direct

Name: 115351745

Synonym: Bamb_1693

Alternate gene names: NA

Gene position: 1875379-1876491 (Clockwise)

Preceding gene: 115351735

Following gene: 115351746

Centisome position: 52.73

GC content: 70.17

Gene sequence:

>1113_bases
ATGCTGGGCGTATGGCTGTGCGGGTGGCTCGTGGTGCATACCGCGCGGGCGGACACGACGACCGTCACCGACCTGGCCGG
GCGGCAGGTCCGGATTCCCGCGCGCGTCGAGCGCGTGCTGCTCGGCGAGGGCCGCCTGCTGCCGGCGCTGGCGGTGGTCG
ACGGCGACGATCCGACGCGCCGCCTCGTTGGCATGATGGGTGACTTCGAGCAACTCGATCCCGCGAGCTACGCGCAATGG
CTCGCGCGCTTCCCGCGCCTGAAGGACGTGCCGCGCATCGGACGCTCGCAGACCGGCAGCTTCAGCGACGAGCGCGCGCT
CGCGCTGCGTCCTCAGGTTGCGATCTTCGGGCTCGGCGGCGGCCACGGCCCCGGCGAGCGCGATCGCGAAACGCTCGCGC
GGCTCGAGGCGGCCGGCGTCGCGATCGTGTTCGTCGACTTCCGGCACGACCCGCTCGTCAACACGCCGCGCAGCATCGCG
CTGCTCGGCCAGGTATTCGGCTCGCCGCAGCGCGCGGCGGAATTCAACGCGTACTGGCAACAGCAGCTCGACCTCGTCCG
CACGCGGCTCGCGACCGCCCACCCGGCCGCGCCGAGCGTGTTCCTCGAAAGCCGCGTCGGCCTGTCGAGCGACTGCTGCG
ACACGATGACCGGCATGATGGGCCGCCTCCTCGACGCCGCCGGCGGCAACAACGTCGCGAAAGGCCGCGTGCCCGGCGAG
CACGGCACGCTGAACCCCGAATACCTGCTGAGCCGCCAGCCCGATTTCTACATCGGCACCGCGATTGGCTCGCTCCAGAC
GCTGCAAAGCGCGCCGCAACGCATCGCGCTCGGCGCCGGCGTGCCGCACGACGCCGCCGTCCGCTCGCTCGACCGGTCGC
TGAAGCGGCCGCAGATCACGCGGCTGCGCGCGGTCCGTGAGCGGCGTGCGTATGCGATCTGGCATCACTTCTACAATTCA
CCGTTCAACGTCGTCGCCGTGCAGGTGATGGCCAAGTGGCTGCATCCGGCACTGTTCACCGATCTCGATCCGCGCACCAC
GTTCGACACGATGGTGCGACGCTTCCAGCCCGTTCCGCTTCAAGGCGAATACTGGATGCAGGAAGGATCCTGA

Upstream 100 bases:

>100_bases
CGCCCATGCCACGGCCCCGGCTCGGCTACAATTAAATGAGAATTATTCTCATTTATATCGTATCGGGAGTCACGTGAAAA
AGACAAGCGGAATGTGGGCC

Downstream 100 bases:

>100_bases
CATGCGCATGCCCGCCTCCTCCATGCGCCGCGCCCTCCTCGTTGCCGGATTGGCCGGCCCGCTCGGCGGCCGGCTCGCGC
CCGCCTGTGCCGCCGATGCA

Product: ABC-type Fe3+-hydroxamate transport system periplasmic component-like protein

Products: NA

Alternate protein names: Ferrichrome/Ferrioxamine B Periplasmic Transporter; Iron Transporter; Fe3+-Hydroxamate ABC Transporter Periplasmic Protein; Iron(III) ABC Transporter; Ferrisiderophore Receptor Irp6A; Copper Amine Oxidase Domain Protein; Copper Amine Oxidase Domain-Containing Protein

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MLGVWLCGWLVVHTARADTTTVTDLAGRQVRIPARVERVLLGEGRLLPALAVVDGDDPTRRLVGMMGDFEQLDPASYAQW
LARFPRLKDVPRIGRSQTGSFSDERALALRPQVAIFGLGGGHGPGERDRETLARLEAAGVAIVFVDFRHDPLVNTPRSIA
LLGQVFGSPQRAAEFNAYWQQQLDLVRTRLATAHPAAPSVFLESRVGLSSDCCDTMTGMMGRLLDAAGGNNVAKGRVPGE
HGTLNPEYLLSRQPDFYIGTAIGSLQTLQSAPQRIALGAGVPHDAAVRSLDRSLKRPQITRLRAVRERRAYAIWHHFYNS
PFNVVAVQVMAKWLHPALFTDLDPRTTFDTMVRRFQPVPLQGEYWMQEGS

Sequences:

>Translated_370_residues
MLGVWLCGWLVVHTARADTTTVTDLAGRQVRIPARVERVLLGEGRLLPALAVVDGDDPTRRLVGMMGDFEQLDPASYAQW
LARFPRLKDVPRIGRSQTGSFSDERALALRPQVAIFGLGGGHGPGERDRETLARLEAAGVAIVFVDFRHDPLVNTPRSIA
LLGQVFGSPQRAAEFNAYWQQQLDLVRTRLATAHPAAPSVFLESRVGLSSDCCDTMTGMMGRLLDAAGGNNVAKGRVPGE
HGTLNPEYLLSRQPDFYIGTAIGSLQTLQSAPQRIALGAGVPHDAAVRSLDRSLKRPQITRLRAVRERRAYAIWHHFYNS
PFNVVAVQVMAKWLHPALFTDLDPRTTFDTMVRRFQPVPLQGEYWMQEGS
>Mature_370_residues
MLGVWLCGWLVVHTARADTTTVTDLAGRQVRIPARVERVLLGEGRLLPALAVVDGDDPTRRLVGMMGDFEQLDPASYAQW
LARFPRLKDVPRIGRSQTGSFSDERALALRPQVAIFGLGGGHGPGERDRETLARLEAAGVAIVFVDFRHDPLVNTPRSIA
LLGQVFGSPQRAAEFNAYWQQQLDLVRTRLATAHPAAPSVFLESRVGLSSDCCDTMTGMMGRLLDAAGGNNVAKGRVPGE
HGTLNPEYLLSRQPDFYIGTAIGSLQTLQSAPQRIALGAGVPHDAAVRSLDRSLKRPQITRLRAVRERRAYAIWHHFYNS
PFNVVAVQVMAKWLHPALFTDLDPRTTFDTMVRRFQPVPLQGEYWMQEGS

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40850; Mature: 40850

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGVWLCGWLVVHTARADTTTVTDLAGRQVRIPARVERVLLGEGRLLPALAVVDGDDPTR
CCHHHHHHHHHHHHCCCCCCHHHHHCCCEEECHHHHHHHHHCCCCEEEEEEEECCCCHHH
RLVGMMGDFEQLDPASYAQWLARFPRLKDVPRIGRSQTGSFSDERALALRPQVAIFGLGG
HHHHHHCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCC
GHGPGERDRETLARLEAAGVAIVFVDFRHDPLVNTPRSIALLGQVFGSPQRAAEFNAYWQ
CCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH
QQLDLVRTRLATAHPAAPSVFLESRVGLSSDCCDTMTGMMGRLLDAAGGNNVAKGRVPGE
HHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
HGTLNPEYLLSRQPDFYIGTAIGSLQTLQSAPQRIALGAGVPHDAAVRSLDRSLKRPQIT
CCCCCHHHHHCCCCCEEEEHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHCCCHHH
RLRAVRERRAYAIWHHFYNSPFNVVAVQVMAKWLHPALFTDLDPRTTFDTMVRRFQPVPL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC
QGEYWMQEGS
CCCHHCCCCC
>Mature Secondary Structure
MLGVWLCGWLVVHTARADTTTVTDLAGRQVRIPARVERVLLGEGRLLPALAVVDGDDPTR
CCHHHHHHHHHHHHCCCCCCHHHHHCCCEEECHHHHHHHHHCCCCEEEEEEEECCCCHHH
RLVGMMGDFEQLDPASYAQWLARFPRLKDVPRIGRSQTGSFSDERALALRPQVAIFGLGG
HHHHHHCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCC
GHGPGERDRETLARLEAAGVAIVFVDFRHDPLVNTPRSIALLGQVFGSPQRAAEFNAYWQ
CCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH
QQLDLVRTRLATAHPAAPSVFLESRVGLSSDCCDTMTGMMGRLLDAAGGNNVAKGRVPGE
HHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
HGTLNPEYLLSRQPDFYIGTAIGSLQTLQSAPQRIALGAGVPHDAAVRSLDRSLKRPQIT
CCCCCHHHHHCCCCCEEEEHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHCCCHHH
RLRAVRERRAYAIWHHFYNSPFNVVAVQVMAKWLHPALFTDLDPRTTFDTMVRRFQPVPL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC
QGEYWMQEGS
CCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA