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The map label for this gene is ygeK [C]

Identifier: 115351674

GI number: 115351674

Start: 1794482

End: 1795294

Strand: Direct

Name: ygeK [C]

Synonym: Bamb_1621

Alternate gene names: 115351674

Gene position: 1794482-1795294 (Clockwise)

Preceding gene: 115351673

Following gene: 115351683

Centisome position: 50.46

GC content: 57.2

Gene sequence:

>813_bases
ATGACCTGCTTCGTTGACCAACTGAAGTCGATTTTCGATCATTATCCGGGCCTCTGGGGTTGCAAGGACGACACGTCTCG
ATTCATTCACGTCAACGACGCGTTCGCGAAAGTAGTTGGCATAGACGATGCCCGTGAGCTTGGGGGAAAGTCCGCATCCG
ACCTGCCGTGCAGGTCGTCGAGTTGCGCGGCCCAATTCCATGCCCAGGATCGTGAGGTGTGCGAAACCGGCCGCGCGATC
AAGGTGCTCGACATTCATCCGTACGCGGAGGACGTCTGGATGGCATTCGTCTTCACGAAGATTCCACTGGTCGATCGAAA
TGAACAAATTGTCGGCACGATCTTTCATGCGGAAGCGTTGTCGCAGATCGACATGATCACGCTCGGTCGCGTGATCGGCG
ATTCGTATGCAGGCAAGAAAATCGGCAGTCTCGTCCAGCAGGGCTCGTATCGGATCGGCTCGCCAAAGGATGCGCTCGAT
CTCACCGAGCGCGAGCGGCAGGTGTTGTTCTTCCTTGCGCGCAACAAGATGGCGAAGGATATCGCGAACATTCTCGAACT
ATCGGTGCGCACGATCGAGCAATACATCGACAATCTGCGCTGCAAGTTCTCTGCGTCAAGCAAGAACGAATTGATCGAAC
TTGCCGCGAGCGCGGGGTATTGCAATCGGATTCCGCAGTCGTTGCTGCGCAACCAGTTGTCGATCGTGATCGAGCGCGGC
GAGCCGCGAACGCGTGCCGAGGCGTGCGGGCCCGCGGATGACCCGCGATCGTCGCAATGCACGAGAGCGAGCTATGAACT
TTCGTTCGAATGA

Upstream 100 bases:

>100_bases
GCGATCGGTCGAGCAGTGGAGGAGACGTTTTCGTGTGCTCGCCTGTTGCGCATGCAACGAAGGCGCATGCGCGGCACAAA
AATTCCCATCGGAGGTGAGC

Downstream 100 bases:

>100_bases
GGCATCGGCTCCCATGCGGCAGGGGCGACCGAGAGCAACTGCTTCAGTTCGATCACGATCGCCTCCGCGGGTATGCCGCT
CGCTTGTACGTCGTCGTGGC

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MTCFVDQLKSIFDHYPGLWGCKDDTSRFIHVNDAFAKVVGIDDARELGGKSASDLPCRSSSCAAQFHAQDREVCETGRAI
KVLDIHPYAEDVWMAFVFTKIPLVDRNEQIVGTIFHAEALSQIDMITLGRVIGDSYAGKKIGSLVQQGSYRIGSPKDALD
LTERERQVLFFLARNKMAKDIANILELSVRTIEQYIDNLRCKFSASSKNELIELAASAGYCNRIPQSLLRNQLSIVIERG
EPRTRAEACGPADDPRSSQCTRASYELSFE

Sequences:

>Translated_270_residues
MTCFVDQLKSIFDHYPGLWGCKDDTSRFIHVNDAFAKVVGIDDARELGGKSASDLPCRSSSCAAQFHAQDREVCETGRAI
KVLDIHPYAEDVWMAFVFTKIPLVDRNEQIVGTIFHAEALSQIDMITLGRVIGDSYAGKKIGSLVQQGSYRIGSPKDALD
LTERERQVLFFLARNKMAKDIANILELSVRTIEQYIDNLRCKFSASSKNELIELAASAGYCNRIPQSLLRNQLSIVIERG
EPRTRAEACGPADDPRSSQCTRASYELSFE
>Mature_269_residues
TCFVDQLKSIFDHYPGLWGCKDDTSRFIHVNDAFAKVVGIDDARELGGKSASDLPCRSSSCAAQFHAQDREVCETGRAIK
VLDIHPYAEDVWMAFVFTKIPLVDRNEQIVGTIFHAEALSQIDMITLGRVIGDSYAGKKIGSLVQQGSYRIGSPKDALDL
TERERQVLFFLARNKMAKDIANILELSVRTIEQYIDNLRCKFSASSKNELIELAASAGYCNRIPQSLLRNQLSIVIERGE
PRTRAEACGPADDPRSSQCTRASYELSFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30105; Mature: 29974

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCFVDQLKSIFDHYPGLWGCKDDTSRFIHVNDAFAKVVGIDDARELGGKSASDLPCRSS
CCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHCCCCHHHHCCCCCCCCCCCCC
SCAAQFHAQDREVCETGRAIKVLDIHPYAEDVWMAFVFTKIPLVDRNEQIVGTIFHAEAL
HHHHHHHHCHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
SQIDMITLGRVIGDSYAGKKIGSLVQQGSYRIGSPKDALDLTERERQVLFFLARNKMAKD
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IANILELSVRTIEQYIDNLRCKFSASSKNELIELAASAGYCNRIPQSLLRNQLSIVIERG
HHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECC
EPRTRAEACGPADDPRSSQCTRASYELSFE
CCCCHHHCCCCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure 
TCFVDQLKSIFDHYPGLWGCKDDTSRFIHVNDAFAKVVGIDDARELGGKSASDLPCRSS
CCHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHCCCCHHHHCCCCCCCCCCCCC
SCAAQFHAQDREVCETGRAIKVLDIHPYAEDVWMAFVFTKIPLVDRNEQIVGTIFHAEAL
HHHHHHHHCHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
SQIDMITLGRVIGDSYAGKKIGSLVQQGSYRIGSPKDALDLTERERQVLFFLARNKMAKD
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IANILELSVRTIEQYIDNLRCKFSASSKNELIELAASAGYCNRIPQSLLRNQLSIVIERG
HHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECC
EPRTRAEACGPADDPRSSQCTRASYELSFE
CCCCHHHCCCCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA