Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is hipO [H]

Identifier: 115351603

GI number: 115351603

Start: 1716622

End: 1717785

Strand: Direct

Name: hipO [H]

Synonym: Bamb_1550

Alternate gene names: 115351603

Gene position: 1716622-1717785 (Clockwise)

Preceding gene: 115351600

Following gene: 115351609

Centisome position: 48.27

GC content: 67.78

Gene sequence:

>1164_bases
GTGACGCACAGCGTGATCCCCGCAGGCCTCGCCGACGAAATGATCGAGATCCGGCACCGCATTCATGCCCACCCCGAACT
GGGCTTCGAGGAATTCGCGACGAGCGACCTCGTTGCCGAGCAGTTGCAGGCATGGGGCTACACGGTGCACCGCGGGCTGG
GCGGCACGGGCGTGGTCGCGCAGCTGAAGGTCGGCAACGGCACGCAGCGCCTCGGCCTGCGCGCCGACATGGACGCGCTG
CCGATCCACGAGTCGACCGGCCTGCCGTACCAGAGCACGATCCCCGGCAAGATGCACGCGTGCGGTCACGATGGCCACAC
GGCGATGCTGCTCGCGGCCGCGAAGCATCTGGCGCGCGAGCGGCGCTTTTCCGGCACGCTGAACCTGATTTTCCAGCCGG
CCGAGGAAGGGCTCGGCGGCGCGAAAAAGATGCTCGACGACGGGCTGTTCGAGCAGTTCCCGTGCGATGCGATCTTCGCG
ATGCACAACATGCCGGGCTTCCCCACGGGCAAGTTCGGCTTCCTGGCGGGGCCGTTCATGGCGTCGTCGGATACCGTGAT
CGTCGACGTGCAGGGGCGCGGCGGCCACGGCGCGGTGCCGCACAAGGCGATCGATTCGGTCGTGGTGTGCGCGCAGATCG
TCATCGCGCTGCAGACGATCGTGTCGCGCAACGTGTCGCCGCTCGACATGGCGATCGTCACGGTCGGCGCGATCCACGCG
GGCGACGCGCCGAACGTGATTCCCGATCGCGCCCAGATGCGCCTGTCGGTGCGCGCGCTGAAGCCCGAGGTGCGCGACCT
GCTCGAGGCGCGCATCAAGGAAGTCGTTCATGCGCAGGCGGCCGTGTTCGGCGCGACCGCGACGATCGACTACCAGCGCC
GCTATCCGGTGCTCGTCAACGATGCGCGGATGACCACGTTCGCACGCGACGTCGCGCGCGAGTGGGTGGGCGAAGCGAAT
CTGATCGACGAGATGGTGCCGCTCACCGGCAGCGAGGATTTCGCGTTCCTGCTCGAGAAGCGGCCGGGCTGCTACCTGAT
CATCGGCAACGGTGACGGCGAGGGCGGCTGCATGGTGCACAACCCCGGCTACGACTTCAACGACGCGGTACTGCCGACCG
GCGCGTCGTACTGGGTCAAGCTGGCCGAGACGTTTCTGGTGTGA

Upstream 100 bases:

>100_bases
AACCCCAGGTTGCCTCCACGACGACTTTCTGTCTGTCCGGTTGCTGCTCAACGGACTATCCTTGCCCGCACATTCCCCAC
CAAATCCAGGAGACGACACC

Downstream 100 bases:

>100_bases
CGGTGAATGCGGGGAATCGGTTCAATCGCGGCATGTTCCGAGCTAGAACACAACATCCCCGCTGAACAACGCCACCACTG
CATCCGGATTCGACGGCCAG

Product: amidohydrolase

Products: NA

Alternate protein names: Benzoylglycine amidohydrolase; Hippuricase [H]

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MTHSVIPAGLADEMIEIRHRIHAHPELGFEEFATSDLVAEQLQAWGYTVHRGLGGTGVVAQLKVGNGTQRLGLRADMDAL
PIHESTGLPYQSTIPGKMHACGHDGHTAMLLAAAKHLARERRFSGTLNLIFQPAEEGLGGAKKMLDDGLFEQFPCDAIFA
MHNMPGFPTGKFGFLAGPFMASSDTVIVDVQGRGGHGAVPHKAIDSVVVCAQIVIALQTIVSRNVSPLDMAIVTVGAIHA
GDAPNVIPDRAQMRLSVRALKPEVRDLLEARIKEVVHAQAAVFGATATIDYQRRYPVLVNDARMTTFARDVAREWVGEAN
LIDEMVPLTGSEDFAFLLEKRPGCYLIIGNGDGEGGCMVHNPGYDFNDAVLPTGASYWVKLAETFLV

Sequences:

>Translated_387_residues
MTHSVIPAGLADEMIEIRHRIHAHPELGFEEFATSDLVAEQLQAWGYTVHRGLGGTGVVAQLKVGNGTQRLGLRADMDAL
PIHESTGLPYQSTIPGKMHACGHDGHTAMLLAAAKHLARERRFSGTLNLIFQPAEEGLGGAKKMLDDGLFEQFPCDAIFA
MHNMPGFPTGKFGFLAGPFMASSDTVIVDVQGRGGHGAVPHKAIDSVVVCAQIVIALQTIVSRNVSPLDMAIVTVGAIHA
GDAPNVIPDRAQMRLSVRALKPEVRDLLEARIKEVVHAQAAVFGATATIDYQRRYPVLVNDARMTTFARDVAREWVGEAN
LIDEMVPLTGSEDFAFLLEKRPGCYLIIGNGDGEGGCMVHNPGYDFNDAVLPTGASYWVKLAETFLV
>Mature_386_residues
THSVIPAGLADEMIEIRHRIHAHPELGFEEFATSDLVAEQLQAWGYTVHRGLGGTGVVAQLKVGNGTQRLGLRADMDALP
IHESTGLPYQSTIPGKMHACGHDGHTAMLLAAAKHLARERRFSGTLNLIFQPAEEGLGGAKKMLDDGLFEQFPCDAIFAM
HNMPGFPTGKFGFLAGPFMASSDTVIVDVQGRGGHGAVPHKAIDSVVVCAQIVIALQTIVSRNVSPLDMAIVTVGAIHAG
DAPNVIPDRAQMRLSVRALKPEVRDLLEARIKEVVHAQAAVFGATATIDYQRRYPVLVNDARMTTFARDVAREWVGEANL
IDEMVPLTGSEDFAFLLEKRPGCYLIIGNGDGEGGCMVHNPGYDFNDAVLPTGASYWVKLAETFLV

Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI87081880, Length=429, Percent_Identity=26.5734265734266, Blast_Score=101, Evalue=9e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017439
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.32 [H]

Molecular weight: Translated: 41695; Mature: 41564

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHSVIPAGLADEMIEIRHRIHAHPELGFEEFATSDLVAEQLQAWGYTVHRGLGGTGVVA
CCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEE
QLKVGNGTQRLGLRADMDALPIHESTGLPYQSTIPGKMHACGHDGHTAMLLAAAKHLARE
EEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
RRFSGTLNLIFQPAEEGLGGAKKMLDDGLFEQFPCDAIFAMHNMPGFPTGKFGFLAGPFM
HHCCCEEEEEEECHHHCCCHHHHHHHCCHHHHCCCHHHHHHHCCCCCCCCCCCCEECCCC
ASSDTVIVDVQGRGGHGAVPHKAIDSVVVCAQIVIALQTIVSRNVSPLDMAIVTVGAIHA
CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEEC
GDAPNVIPDRAQMRLSVRALKPEVRDLLEARIKEVVHAQAAVFGATATIDYQRRYPVLVN
CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEE
DARMTTFARDVAREWVGEANLIDEMVPLTGSEDFAFLLEKRPGCYLIIGNGDGEGGCMVH
CCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCCCCEEEE
NPGYDFNDAVLPTGASYWVKLAETFLV
CCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
THSVIPAGLADEMIEIRHRIHAHPELGFEEFATSDLVAEQLQAWGYTVHRGLGGTGVVA
CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEE
QLKVGNGTQRLGLRADMDALPIHESTGLPYQSTIPGKMHACGHDGHTAMLLAAAKHLARE
EEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
RRFSGTLNLIFQPAEEGLGGAKKMLDDGLFEQFPCDAIFAMHNMPGFPTGKFGFLAGPFM
HHCCCEEEEEEECHHHCCCHHHHHHHCCHHHHCCCHHHHHHHCCCCCCCCCCCCEECCCC
ASSDTVIVDVQGRGGHGAVPHKAIDSVVVCAQIVIALQTIVSRNVSPLDMAIVTVGAIHA
CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEEC
GDAPNVIPDRAQMRLSVRALKPEVRDLLEARIKEVVHAQAAVFGATATIDYQRRYPVLVN
CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEE
DARMTTFARDVAREWVGEANLIDEMVPLTGSEDFAFLLEKRPGCYLIIGNGDGEGGCMVH
CCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCCCCEEEE
NPGYDFNDAVLPTGASYWVKLAETFLV
CCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7730270; 10688204 [H]