Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is gltJ [H]

Identifier: 115351569

GI number: 115351569

Start: 1664612

End: 1665334

Strand: Direct

Name: gltJ [H]

Synonym: Bamb_1516

Alternate gene names: 115351569

Gene position: 1664612-1665334 (Clockwise)

Preceding gene: 115351568

Following gene: 115351570

Centisome position: 46.8

GC content: 69.71

Gene sequence:

>723_bases
ATGCTCGGCTTGGCTCCCAAATATCTGTCCTGGCTCTGGCAGGGCTTCCTGCTCACGCTCGGCCTCGCGGCCGCGTCGGC
GCTCGCCGCGACCGTCGGCGGGCTGCTGCTCGCCGTCATGCGGCATGCACGCGGCACAGCAGTGCGCACGGTGGCGGCCG
GCTACGTCGTCGCATTCCGCAACACGCCGCTGCTCGTGCAATTGCTGTTCTGGTACTTCGGCGTCGCGTCGTTGCTGCCC
GATACGTGGATCACGTGGCTGAACGCGCGTCATGAACTGAGCGCGGGCCCGCTCACGCTCGCGTGGCCGTCGTTCGAGTT
CGTCGCCGGCTGGGTCGGCTTGAGCGCCTACACGGCCGCGTTCGTCGCCGAGGAATGCGAAGCCGGGCTGCGCGGCGTGC
GCGGTGCGCAACACGACGCGGCCGCGGCGCTCGGCCTCACGCCGATGCAGTCGCTGCGCTACGTGGTGCTGCCGCAGGCC
GTGCGCATCGCGCTGCCGTCGCTGTTCGGCCAATACATGAATCTCGTGAAGAACTCGTCGCTCGCGATGGCGATCGGTGT
CGCCGAGCTGTCGTATGCGTCGCGGCAGGTCGAGACGGAGACGTTCAAGACCTTTGCCGCGTTCGGTGTCGCGACCGTGC
TGTACGTCGCCGCGGTGGCCGCGATCGAGGCCGGCGCCTACGCGGCCACGCAATGGCGCGACCGGCTCGCGGCGGGGCGT
TGA

Upstream 100 bases:

>100_bases
CGCCGCGATCCGCCGCCGGCTGTGCCGGGATGCGCGGGTCGCGGCGCTTTGCGCTTGCTTCCATCTTCTTTCGCATTTTT
CAGCGACCGCACACACCAGC

Downstream 100 bases:

>100_bases
CGATGGACGTCTCACTGCTGCTCGACAACCTGCCGTACCTGCTCGTCGGTGCGTTCCCGGACGGTCCGCTCGGCGGCGCC
GCGCTGTCGCTCGTGCTGGC

Product: polar amino acid ABC transporter inner membrane subunit

Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MLGLAPKYLSWLWQGFLLTLGLAAASALAATVGGLLLAVMRHARGTAVRTVAAGYVVAFRNTPLLVQLLFWYFGVASLLP
DTWITWLNARHELSAGPLTLAWPSFEFVAGWVGLSAYTAAFVAEECEAGLRGVRGAQHDAAAALGLTPMQSLRYVVLPQA
VRIALPSLFGQYMNLVKNSSLAMAIGVAELSYASRQVETETFKTFAAFGVATVLYVAAVAAIEAGAYAATQWRDRLAAGR

Sequences:

>Translated_240_residues
MLGLAPKYLSWLWQGFLLTLGLAAASALAATVGGLLLAVMRHARGTAVRTVAAGYVVAFRNTPLLVQLLFWYFGVASLLP
DTWITWLNARHELSAGPLTLAWPSFEFVAGWVGLSAYTAAFVAEECEAGLRGVRGAQHDAAAALGLTPMQSLRYVVLPQA
VRIALPSLFGQYMNLVKNSSLAMAIGVAELSYASRQVETETFKTFAAFGVATVLYVAAVAAIEAGAYAATQWRDRLAAGR
>Mature_240_residues
MLGLAPKYLSWLWQGFLLTLGLAAASALAATVGGLLLAVMRHARGTAVRTVAAGYVVAFRNTPLLVQLLFWYFGVASLLP
DTWITWLNARHELSAGPLTLAWPSFEFVAGWVGLSAYTAAFVAEECEAGLRGVRGAQHDAAAALGLTPMQSLRYVVLPQA
VRIALPSLFGQYMNLVKNSSLAMAIGVAELSYASRQVETETFKTFAAFGVATVLYVAAVAAIEAGAYAATQWRDRLAAGR

Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786874, Length=216, Percent_Identity=31.4814814814815, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1788226, Length=207, Percent_Identity=34.2995169082126, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI48994930, Length=258, Percent_Identity=29.0697674418605, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1786873, Length=211, Percent_Identity=28.436018957346, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1788645, Length=204, Percent_Identity=29.4117647058824, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1787030, Length=205, Percent_Identity=28.780487804878, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787087, Length=206, Percent_Identity=27.1844660194175, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI87082239, Length=206, Percent_Identity=28.1553398058252, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25584; Mature: 25584

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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>Mature Secondary Structure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PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-glutamate [Periplasm]; H2O [C]

Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]