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The map label for this gene is rpiA [H]

Identifier: 115351503

GI number: 115351503

Start: 1600417

End: 1601109

Strand: Direct

Name: rpiA [H]

Synonym: Bamb_1450

Alternate gene names: 115351503

Gene position: 1600417-1601109 (Clockwise)

Preceding gene: 115351502

Following gene: 115351504

Centisome position: 45.0

GC content: 66.81

Gene sequence:

>693_bases
ATGACTCAAGACGAACTCAAACGCCTGGTCGGCCAGGCGGCCGCCGATTATGTGATCCAGAACGTGCCGGAAGGCGCCGT
GATCGGCGTCGGCACCGGCTCGACCGCCAACTGCTTCATCGACGCGCTCGCGGCCGTCAAAGCGCGCTATCGCGGCGCCG
TGTCGAGCTCGCTCGCGACGACCGAGCGCCTGAAATCGCACGGCATCAAGGTGTTCGACCTGAACGAGATCGAGTCGCTG
CAGGTGTACGTCGACGGCGCCGACGAGATCGACGCAAGCGGTGCAATGATCAAGGGCGGCGGCGGTGCATTGACGCGCGA
AAAGATCGTTGCGTCGGTGGCCGATACGTTCGTCTGCATCGCGGACGCCAGCAAGCGCGTGCCGGTGCTCGGCGCATTTC
CGCTGCCGATCGAGGTCGTGCCGATGGCGCGCACGGCGATCGGCCGGCGCGTGACTGCGCTCGGCGGCGTGCCGGTGCTG
CGCGTGACGAAGGACGGCGCGCCGTACATCACCGACAACGGCAACGAGATCATCGACGTGAAGGGGCTGCAGATCGCCGA
TCCGCGCGGTTTCGAAGCGCAGGTCAACGCGTGGCCGGGCGTCGTGACGGTCGGCCTGTTCGCCGAGCGCGGCGCGAATC
TGTGCCTGCTCGGCACGCCGAACGGCGTCGAGACGATCGTTTATCCCGCTTAA

Upstream 100 bases:

>100_bases
TCGGCTTGTCCTGGGCCGACATCCGCGCGGAAAAAGCCCGGGGCGTCTGGCGAGTCCGGTAAACTGGCGGTTTTCCGCAA
TCCCGCTGCATTCCCACCTC

Downstream 100 bases:

>100_bases
TCAAGACTGAATGAGAAGCAGTCCGTAATGGCGTCAACAAGCCGTAATGGATTGCATGGTTAAATATTGTGGAAGTCCCG
GCCCGGCAAGCGCAGCGCGC

Product: ribose-5-phosphate isomerase A

Products: NA

Alternate protein names: Phosphoriboisomerase A; PRI [H]

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MTQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAAVKARYRGAVSSSLATTERLKSHGIKVFDLNEIESL
QVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFVCIADASKRVPVLGAFPLPIEVVPMARTAIGRRVTALGGVPVL
RVTKDGAPYITDNGNEIIDVKGLQIADPRGFEAQVNAWPGVVTVGLFAERGANLCLLGTPNGVETIVYPA

Sequences:

>Translated_230_residues
MTQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAAVKARYRGAVSSSLATTERLKSHGIKVFDLNEIESL
QVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFVCIADASKRVPVLGAFPLPIEVVPMARTAIGRRVTALGGVPVL
RVTKDGAPYITDNGNEIIDVKGLQIADPRGFEAQVNAWPGVVTVGLFAERGANLCLLGTPNGVETIVYPA
>Mature_229_residues
TQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAAVKARYRGAVSSSLATTERLKSHGIKVFDLNEIESLQ
VYVDGADEIDASGAMIKGGGGALTREKIVASVADTFVCIADASKRVPVLGAFPLPIEVVPMARTAIGRRVTALGGVPVLR
VTKDGAPYITDNGNEIIDVKGLQIADPRGFEAQVNAWPGVVTVGLFAERGANLCLLGTPNGVETIVYPA

Specific function: Nonoxidative branch of the pentose phosphate pathway. [C]

COG id: COG0120

COG function: function code G; Ribose 5-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribose 5-phosphate isomerase family [H]

Homologues:

Organism=Homo sapiens, GI94536842, Length=221, Percent_Identity=36.6515837104072, Blast_Score=115, Evalue=5e-26,
Organism=Escherichia coli, GI1789280, Length=227, Percent_Identity=61.6740088105727, Blast_Score=271, Evalue=2e-74,
Organism=Caenorhabditis elegans, GI17551758, Length=200, Percent_Identity=38, Blast_Score=100, Evalue=5e-22,
Organism=Saccharomyces cerevisiae, GI6324669, Length=235, Percent_Identity=27.6595744680851, Blast_Score=84, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281364072, Length=209, Percent_Identity=35.4066985645933, Blast_Score=99, Evalue=3e-21,

Paralogues:

None

Copy number: 740 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004788
- InterPro:   IPR020672 [H]

Pfam domain/function: PF06026 Rib_5-P_isom_A [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 23892; Mature: 23760

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAAVKARYRGAVSSSLAT
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TERLKSHGIKVFDLNEIESLQVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFVCI
HHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHEEEE
ADASKRVPVLGAFPLPIEVVPMARTAIGRRVTALGGVPVLRVTKDGAPYITDNGNEIIDV
ECCCCCCCEEECCCCCEEEECHHHHHHCCEEEECCCCEEEEEECCCCCEEECCCCEEEEE
KGLQIADPRGFEAQVNAWPGVVTVGLFAERGANLCLLGTPNGVETIVYPA
CCEEEECCCCCEEEECCCCCEEEEEEHHHCCCCEEEEECCCCCCEEEECC
>Mature Secondary Structure 
TQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAAVKARYRGAVSSSLAT
CHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TERLKSHGIKVFDLNEIESLQVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFVCI
HHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHEEEE
ADASKRVPVLGAFPLPIEVVPMARTAIGRRVTALGGVPVLRVTKDGAPYITDNGNEIIDV
ECCCCCCCEEECCCCCEEEECHHHHHHCCEEEECCCCEEEEEECCCCCEEECCCCEEEEE
KGLQIADPRGFEAQVNAWPGVVTVGLFAERGANLCLLGTPNGVETIVYPA
CCEEEECCCCCEEEECCCCCEEEEEEHHHCCCCEEEEECCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA