| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351496
Identifier: 115351496
GI number: 115351496
Start: 1592855
End: 1593193
Strand: Direct
Name: 115351496
Synonym: Bamb_1443
Alternate gene names: NA
Gene position: 1592855-1593193 (Clockwise)
Preceding gene: 115351495
Following gene: 115351497
Centisome position: 44.79
GC content: 70.21
Gene sequence:
>339_bases ATGGCGGCGCGCCGGCGCGACCGCCATCCGGATTGCCACCGGCGCTGCGGCGTCGGTCGTGCGCGTCGAATCCACCCCGA CTCCGTCCCGACACGGTCACGTGCGCGTCCCGCGCGTCCGTCATTCCCGGCTGAACTTCGCCGCCCGGCGAACCCGCCCC GCGCATCGCGCGAATTCTCGATCAACTTGATGCGCAGCCCGTCCGGCGAAGCGCAGCCGACGCCGCTGTCGATCCTGCAG CTCGGCGCGACTGAGCTGTGCGCGACGAACGTACTGACGCCGCATGACGACGATGCGGCGCACGTCCGGGCGCCGGGACG GATATTTGGAAATCCTTGA
Upstream 100 bases:
>100_bases GTTGCGTTCGAGCCTCGGATTGCGGCCGAAGAACGGGCTCGTGATCACCACGGTCTACAACTACGGGTACCGACTGGAAC GGACCTGATCAGTCGACCGG
Downstream 100 bases:
>100_bases TATTGATTATCAACACGGGAAGCCACTTCGATAATTGCATCCATCTGGCCATGGCAACACGCAATTGGCAATCAATAAAG GATCAATCATGCATGTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MAARRRDRHPDCHRRCGVGRARRIHPDSVPTRSRARPARPSFPAELRRPANPPRASREFSINLMRSPSGEAQPTPLSILQ LGATELCATNVLTPHDDDAAHVRAPGRIFGNP
Sequences:
>Translated_112_residues MAARRRDRHPDCHRRCGVGRARRIHPDSVPTRSRARPARPSFPAELRRPANPPRASREFSINLMRSPSGEAQPTPLSILQ LGATELCATNVLTPHDDDAAHVRAPGRIFGNP >Mature_111_residues AARRRDRHPDCHRRCGVGRARRIHPDSVPTRSRARPARPSFPAELRRPANPPRASREFSINLMRSPSGEAQPTPLSILQL GATELCATNVLTPHDDDAAHVRAPGRIFGNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12398; Mature: 12267
Theoretical pI: Translated: 12.13; Mature: 12.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARRRDRHPDCHRRCGVGRARRIHPDSVPTRSRARPARPSFPAELRRPANPPRASREFS CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEE INLMRSPSGEAQPTPLSILQLGATELCATNVLTPHDDDAAHVRAPGRIFGNP EEEEECCCCCCCCCCHHHHHHCCHHHHHHCCCCCCCCCCCEEECCCCCCCCC >Mature Secondary Structure AARRRDRHPDCHRRCGVGRARRIHPDSVPTRSRARPARPSFPAELRRPANPPRASREFS CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEE INLMRSPSGEAQPTPLSILQLGATELCATNVLTPHDDDAAHVRAPGRIFGNP EEEEECCCCCCCCCCHHHHHHCCHHHHHHCCCCCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA