| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351426
Identifier: 115351426
GI number: 115351426
Start: 1508585
End: 1508902
Strand: Direct
Name: 115351426
Synonym: Bamb_1373
Alternate gene names: NA
Gene position: 1508585-1508902 (Clockwise)
Preceding gene: 115351422
Following gene: 115351429
Centisome position: 42.42
GC content: 63.52
Gene sequence:
>318_bases ATGGCCACGTATTCCAACGAAGCGGTGCTCGACGCATTGAGACGAGTGCAGTACCGCCAGGTACCGTGGGCGCGCCGCCC GGGCGTGTTCGAGTATCTCCGGTCGCTAGGACTGATGGACACGGTCAGGCAGAAGACCGTTGCGCCCGCACCGGGTTTTC ATGCGCCGGTCGACATCGCGGTGCTGACCGACAACGGTCGAGCCGAATGCGCGCGCCTCGAGCGCGACGAGAAATTACTT TCCTGGACCGATCGCCGCATGGACGACTACGCATTGAGCGAAGCCAGCGCCGTGGCGATTCTCGAAAGCCGCCTGTAG
Upstream 100 bases:
>100_bases GTCGAACGTCGGCCTCCAGAATCGGTGGCGGTATCGGCGGGCGGAGCTCCCGCCCGGCACGCCGCTTCGCATTGTCGCTG CACTTTAAGAAAGAATCGAG
Downstream 100 bases:
>100_bases CGGCGCGCGCCTGTCCTCGCGCAGCCCTGCGCGACACGCCGAAAAAAAGCCCGTATCGCGAGGATACGGGCGTACCGGAT ACTTTTGCTGTTGCCACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MATYSNEAVLDALRRVQYRQVPWARRPGVFEYLRSLGLMDTVRQKTVAPAPGFHAPVDIAVLTDNGRAECARLERDEKLL SWTDRRMDDYALSEASAVAILESRL
Sequences:
>Translated_105_residues MATYSNEAVLDALRRVQYRQVPWARRPGVFEYLRSLGLMDTVRQKTVAPAPGFHAPVDIAVLTDNGRAECARLERDEKLL SWTDRRMDDYALSEASAVAILESRL >Mature_104_residues ATYSNEAVLDALRRVQYRQVPWARRPGVFEYLRSLGLMDTVRQKTVAPAPGFHAPVDIAVLTDNGRAECARLERDEKLLS WTDRRMDDYALSEASAVAILESRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11909; Mature: 11777
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATYSNEAVLDALRRVQYRQVPWARRPGVFEYLRSLGLMDTVRQKTVAPAPGFHAPVDIA CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEE VLTDNGRAECARLERDEKLLSWTDRRMDDYALSEASAVAILESRL EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ATYSNEAVLDALRRVQYRQVPWARRPGVFEYLRSLGLMDTVRQKTVAPAPGFHAPVDIA CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEE VLTDNGRAECARLERDEKLLSWTDRRMDDYALSEASAVAILESRL EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA