Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351421

Identifier: 115351421

GI number: 115351421

Start: 1503851

End: 1504564

Strand: Direct

Name: 115351421

Synonym: Bamb_1368

Alternate gene names: NA

Gene position: 1503851-1504564 (Clockwise)

Preceding gene: 115351419

Following gene: 115351422

Centisome position: 42.28

GC content: 64.29

Gene sequence:

>714_bases
ATGGATCTGAAGGAACTCGACGTATTGGGAGCGGATGTAGGCGATCACTGGTACTACGCGTCGAAGGCGCGCGCGATCCG
TCGGTTCCTGGGCTCGCCGGATGCGAGCCGGATCCTCGACGTCGGCGCGGGCTCGGGATTCTTTTCCAAGCATTTGCTCG
AGCGCACGCAGGCGACCGAAGCGTGGTGTGTCGATACGAGCTACCCCGACGATACCGACGGCGAGGCGGCCGGCAAGCCC
GTCCATTTTCGCCGCGCCGTCGATCGATTCGATGCCGATCTCGTGTTGCTGATGGATGTCCTCGAGCACGTCGATGACGA
TGTCGGGCTGCTTGCGCGATATGTGGAGGGTGCGCCCAAGGGCAGCCGGTTCCTGATCACGGTTCCCGCGTTTCAGTTCC
TCTGGAGCGCGCATGACGATTTTCTCGAGCACAAGCGCAGGTACACGCTCGACGGTCTTGAAGACGTCGCGCGTCGCGCG
GGGCTGGAGGTCGAGCACGGCGCGTACTACTTCGGCCTCACGTTTCCGCTCGCGGCGGCAATGCGGCTGAGCGAACGCGC
GCGTCGGCAACCGCGTGAACCGGCGTCGCAATTGCGCCGGCACCATCCGGTCGTCAACGGTTTGCTCAAGCTGATCTGCC
GGGCCGAGTTGCCGATGTTCCGGTTCAATCGGATGGCGGGCCTCACGGTCATCTGCGTCGCGCGCAAGCGGTGA

Upstream 100 bases:

>100_bases
CGATTCGCGCAACTTGCCGTGGGTCCGTCGGCCGAGGCGCGGTAAGATCGGCATCAGTGGCTGGATGGATCAGCATGGTG
GCCGACACGGGGGAGGCGTC

Downstream 100 bases:

>100_bases
GCAACTGGCGGATCGTATCGCCGGTTCGGGGGCGAGGCAGGATGCGCATTGCCGCTCGCGTCGAGGCCGCCACGTGGTGT
CACGTCATCTCGAAAAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Methyltransferase; Generic Methyltransferase; SAM-Dependent Methyltransferase; S-Adenosyl-L-Methionine-Dependent Methyltransferase; Methylase

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MDLKELDVLGADVGDHWYYASKARAIRRFLGSPDASRILDVGAGSGFFSKHLLERTQATEAWCVDTSYPDDTDGEAAGKP
VHFRRAVDRFDADLVLLMDVLEHVDDDVGLLARYVEGAPKGSRFLITVPAFQFLWSAHDDFLEHKRRYTLDGLEDVARRA
GLEVEHGAYYFGLTFPLAAAMRLSERARRQPREPASQLRRHHPVVNGLLKLICRAELPMFRFNRMAGLTVICVARKR

Sequences:

>Translated_237_residues
MDLKELDVLGADVGDHWYYASKARAIRRFLGSPDASRILDVGAGSGFFSKHLLERTQATEAWCVDTSYPDDTDGEAAGKP
VHFRRAVDRFDADLVLLMDVLEHVDDDVGLLARYVEGAPKGSRFLITVPAFQFLWSAHDDFLEHKRRYTLDGLEDVARRA
GLEVEHGAYYFGLTFPLAAAMRLSERARRQPREPASQLRRHHPVVNGLLKLICRAELPMFRFNRMAGLTVICVARKR
>Mature_237_residues
MDLKELDVLGADVGDHWYYASKARAIRRFLGSPDASRILDVGAGSGFFSKHLLERTQATEAWCVDTSYPDDTDGEAAGKP
VHFRRAVDRFDADLVLLMDVLEHVDDDVGLLARYVEGAPKGSRFLITVPAFQFLWSAHDDFLEHKRRYTLDGLEDVARRA
GLEVEHGAYYFGLTFPLAAAMRLSERARRQPREPASQLRRHHPVVNGLLKLICRAELPMFRFNRMAGLTVICVARKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26813; Mature: 26813

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLKELDVLGADVGDHWYYASKARAIRRFLGSPDASRILDVGAGSGFFSKHLLERTQATE
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHEEECCCCCCHHHHHHHHHHHCCC
AWCVDTSYPDDTDGEAAGKPVHFRRAVDRFDADLVLLMDVLEHVDDDVGLLARYVEGAPK
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCC
GSRFLITVPAFQFLWSAHDDFLEHKRRYTLDGLEDVARRAGLEVEHGAYYFGLTFPLAAA
CCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHH
MRLSERARRQPREPASQLRRHHPVVNGLLKLICRAELPMFRFNRMAGLTVICVARKR
HHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEEECCC
>Mature Secondary Structure
MDLKELDVLGADVGDHWYYASKARAIRRFLGSPDASRILDVGAGSGFFSKHLLERTQATE
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHEEECCCCCCHHHHHHHHHHHCCC
AWCVDTSYPDDTDGEAAGKPVHFRRAVDRFDADLVLLMDVLEHVDDDVGLLARYVEGAPK
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCC
GSRFLITVPAFQFLWSAHDDFLEHKRRYTLDGLEDVARRAGLEVEHGAYYFGLTFPLAAA
CCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHH
MRLSERARRQPREPASQLRRHHPVVNGLLKLICRAELPMFRFNRMAGLTVICVARKR
HHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA