| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351325
Identifier: 115351325
GI number: 115351325
Start: 1392839
End: 1393006
Strand: Direct
Name: 115351325
Synonym: Bamb_1272
Alternate gene names: NA
Gene position: 1392839-1393006 (Clockwise)
Preceding gene: 115351323
Following gene: 115351326
Centisome position: 39.16
GC content: 66.67
Gene sequence:
>168_bases ATGGAATCTTATCTATCGTCGTTGGCGGCCGGCCTGCTGATCGGCGTCGTGTACAGCGTGATCAAGGTGCGCTCGCCGGC GCCGCCGCTGATCGCACTGATCGGCCTTGCCGGCATGCTGGTCGGCGCGCAGGCCATCGGGCCCGTGCGTCACTGGCTCG GCTTCTGA
Upstream 100 bases:
>100_bases GCCGGACAGGGTGACAGAGAAGCGAAGAGGAAGCGAAGGCAGCGAAGCATGCGGCCGACGCGATGCGGGTCATTCTAATC CGGTCGGGAGAAAAATCGTT
Downstream 100 bases:
>100_bases CTGTTTCGAGGACATGTTAATGAGCGCAACCGATACCCAACCGGATCTGATCCTGCACAACGGGCGCATCACGACGCTCG ATCGTGCGAACCCCGTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 55; Mature: 55
Protein sequence:
>55_residues MESYLSSLAAGLLIGVVYSVIKVRSPAPPLIALIGLAGMLVGAQAIGPVRHWLGF
Sequences:
>Translated_55_residues MESYLSSLAAGLLIGVVYSVIKVRSPAPPLIALIGLAGMLVGAQAIGPVRHWLGF >Mature_55_residues MESYLSSLAAGLLIGVVYSVIKVRSPAPPLIALIGLAGMLVGAQAIGPVRHWLGF
Specific function: Unknown
COG id: COG4317
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5675; Mature: 5675
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESYLSSLAAGLLIGVVYSVIKVRSPAPPLIALIGLAGMLVGAQAIGPVRHWLGF CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MESYLSSLAAGLLIGVVYSVIKVRSPAPPLIALIGLAGMLVGAQAIGPVRHWLGF CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA