| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is bcsA [H]
Identifier: 115351316
GI number: 115351316
Start: 1383192
End: 1385729
Strand: Direct
Name: bcsA [H]
Synonym: Bamb_1263
Alternate gene names: 115351316
Gene position: 1383192-1385729 (Clockwise)
Preceding gene: 115351315
Following gene: 115351317
Centisome position: 38.89
GC content: 70.29
Gene sequence:
>2538_bases ATGAAAGCCGCGTTCGCGTCGCGCTGGCGCGCCACGGTCCGACGTGCGACCGACTGGTGCGCGCGCGGAATCGGGCTGCC GGCCGAGCGCACGCTGCTCGACTGGCTCGTGCGGCTGTTCTTCCATGCGCCGCCGCCCGGCCGGCCCGACCCTATCCGCC GCCGGGCGCGCACCGCGTTCCTCTGGCTCGCGCGCGAATGGGGCGTGCTGCAGCCGCTGAGCCCGCGTGAATGGCTGTGG CGCGCGATCGTGCGCGCGCCGCGCGCGGCCGGCGAGCAGCCCGCGCGCGATCCGCTCGCGTGGTTCGACACGTTCGTCGT GCCGGTCTACGTCGTAGTCCGCGCGCTCGGCGCACGCATCGGCGCACAGCTCGAGCGTTTGCCGTGGGCACGCTGGGGCG GCTGGCTCGACGCGCGCGCGAACGGCGTCGGCCGGCACCGCTGGCTCGCGCCGCTGCTGCTGTGCGCGGGCGGGCTCATG TGGGCCGCGGCCGCGATGTCGCCGCTGATGCCCGGCGCGCAGTTCGCGTTTTTCGCGATCGTCGCGGTGCTGGCGCTCGC GCTGCGCCGCCTGCCGGGCCATCTGCCGACCCTCGCGCTCGCATCGCTCGCGCTGCTCGCCACGCTGCGCTACGTGTGGT GGCGCACGACCCAGACGCTCGATTTCCGCAGCCCGGTCGAGGCGGTCGCCGGCTACCTGCTGTACGGCGCCGAAGCCTAT ACGTGGATGATCCTGCTGCTCGGCTTCGTCCAGACCGCGTGGCCGCTCGACCGGCCGATCGTGCCGCTGCCCGACGACCC GGACAGCTGGCCGAGCGTCGACATCTACATCCCGACCTACAACGAGCCGCTGTCGGTCGTGAAGCCGACCGTGTTCGCCG CGCAGAGCATCGACTGGCCGACCGGCAAGCTGCGCGTGTACCTGCTCGACGACGGCAAGCGCCCCGAGTTCGCGGCGTTC GCGCGGGAGGCCGGCATCGGTTACCTGACGCGCGACGACAACCTGCACGCGAAGGCCGGCAACATCAACCGCGCGCTGCC GAAGACGCACGGCGAATACATCGCGATCTTCGACTGCGATCACGTGCCGACGCGCTCGTTCCTGCAGACCACGATGGGCG TGTTCCTGCGCGACCCGAAATGCGCGCTGGTGCAGACGCCGCACCATTTCTTCTCGCCCGATCCGTTCGAGCGCAACCTC GGCACGTTCCGCGAGATCCCGAACGAGGGCAACCTGTTCTACGGGCTCGTGCAGTCGGGCAACGACCTGTGGAACGCGAC GTTCTTCTGCGGATCGTGCGCGGTGCTCAAGCGCACCGCGCTGGAGGAGGTGGGCGGCGTCGCGGTCGAGACCGTGACCG AGGACGCGCACACCGCGCTCAAGCTGCATCGCCGCGGCTACACGTCGGCGTACCTGCCGACCGTGCAGGCGGCCGGCCTG GCGACCGAGAGCCTCGCGGGCCACGTGAAGCAGCGCACGCGCTGGGCGCGCGGGATGGCGCAGATCTTCCGCATCGACAA CCCGTTCCTCGGGCGCGGGCTCGGCTTCATCCAGCGGATCTGCTACGGCAACGCGATGCTGCATTTCTTCTACGGGATCC CGCGGCTCGTGTTCCTGACGATTCCGCTCGCGTACCTGTTCTTCCACCTGTACTTCATCAACGCGTCGTCGATCGCGCTC GCGAGCTACGTGATCCCGTACCTGGTGCTCGCGAACGTCGCGAACTCGCGGATGCAGGGCCGCTATCGCCATTCGTTCTG GGCCGAGGTCTACGAATCGGTGCTCGCGTGGTACATCGCGCTGCCGACCACCGTCGCGTTCTTAAGCCCGAAGCACGGCA AGTTCAACGTGACCGATAAAGGCGGCAAGATCGACGAAGGTTACGTCGACTGGTCGACGTCGAAGCCGTACCTCGTGCTG TTCGCGCTGAACGTGCTCGCGATCGCGGCCGGGCTGTGGCGGCTCGTGGCCGACCAGGGCGACGAGGCCTCGACGATCCT GATCACGCTCGGCTGGACCGTCTACAACCTCGCGATGCTCGGCGCGGCGCTGGCGGTTGCGCGCGAAACCAAGCAGGTGC GCGTCACGCACCGGATCGCGATGCGCGTGCCGGCGACGCTGCTGCTCGCCGACGGCTCGACGGCCGCGTGCTTCACGAGC GACTACTCGACCGGCGGCCTCGGCCTCGAGGCGGTGCCGGGGCTGCCGCTCGCGATCGGCGACACGCTGACGGTGTGCGT GACGCGCGGCGACCGGCCGTTCCCGTTCCCGGTACGCGTGAGCCGCGTGACGCCGACCCACGTCGGCGTGAGCTTCGAGG CGCTGACGCTCGAGCAGGAGCGCCAGCTCGTGCAGTGCACGTTCGGCCGCGCGGACGCGTGGCTCGACTGGCACGCGAGC ACGCGCACGGACACGCCGCTGCGCGGGCTGAAGGAAGTGCTGCGCGTGGGCCTCGACGGTTACGTACGGATGTGGAAGGG TGTCGCGCGCGGCGTGCAGTCGATGCTGGCACCGAAGCTCGATCGGGCGCGCGACTGA
Upstream 100 bases:
>100_bases ACGCGCCGTATTCGCAGGCGTCGCACGACCTGAACGGCGTCGCGAACTGGGTCGATACGTGGCTCACGGCGGCCGCGGCC GGCCGTGCGGGAGCGTCGCG
Downstream 100 bases:
>100_bases CGCGGCGCCCATCACGGAGTGGTTTAGATGACGTTCTGGAATCTGTATTTCATCCTGAAGTTCGCGCTGTTCGCGACCGG CCACCTGCAGCCGCTGTGGC
Product: cellulose synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 845; Mature: 845
Protein sequence:
>845_residues MKAAFASRWRATVRRATDWCARGIGLPAERTLLDWLVRLFFHAPPPGRPDPIRRRARTAFLWLAREWGVLQPLSPREWLW RAIVRAPRAAGEQPARDPLAWFDTFVVPVYVVVRALGARIGAQLERLPWARWGGWLDARANGVGRHRWLAPLLLCAGGLM WAAAAMSPLMPGAQFAFFAIVAVLALALRRLPGHLPTLALASLALLATLRYVWWRTTQTLDFRSPVEAVAGYLLYGAEAY TWMILLLGFVQTAWPLDRPIVPLPDDPDSWPSVDIYIPTYNEPLSVVKPTVFAAQSIDWPTGKLRVYLLDDGKRPEFAAF AREAGIGYLTRDDNLHAKAGNINRALPKTHGEYIAIFDCDHVPTRSFLQTTMGVFLRDPKCALVQTPHHFFSPDPFERNL GTFREIPNEGNLFYGLVQSGNDLWNATFFCGSCAVLKRTALEEVGGVAVETVTEDAHTALKLHRRGYTSAYLPTVQAAGL ATESLAGHVKQRTRWARGMAQIFRIDNPFLGRGLGFIQRICYGNAMLHFFYGIPRLVFLTIPLAYLFFHLYFINASSIAL ASYVIPYLVLANVANSRMQGRYRHSFWAEVYESVLAWYIALPTTVAFLSPKHGKFNVTDKGGKIDEGYVDWSTSKPYLVL FALNVLAIAAGLWRLVADQGDEASTILITLGWTVYNLAMLGAALAVARETKQVRVTHRIAMRVPATLLLADGSTAACFTS DYSTGGLGLEAVPGLPLAIGDTLTVCVTRGDRPFPFPVRVSRVTPTHVGVSFEALTLEQERQLVQCTFGRADAWLDWHAS TRTDTPLRGLKEVLRVGLDGYVRMWKGVARGVQSMLAPKLDRARD
Sequences:
>Translated_845_residues MKAAFASRWRATVRRATDWCARGIGLPAERTLLDWLVRLFFHAPPPGRPDPIRRRARTAFLWLAREWGVLQPLSPREWLW RAIVRAPRAAGEQPARDPLAWFDTFVVPVYVVVRALGARIGAQLERLPWARWGGWLDARANGVGRHRWLAPLLLCAGGLM WAAAAMSPLMPGAQFAFFAIVAVLALALRRLPGHLPTLALASLALLATLRYVWWRTTQTLDFRSPVEAVAGYLLYGAEAY TWMILLLGFVQTAWPLDRPIVPLPDDPDSWPSVDIYIPTYNEPLSVVKPTVFAAQSIDWPTGKLRVYLLDDGKRPEFAAF AREAGIGYLTRDDNLHAKAGNINRALPKTHGEYIAIFDCDHVPTRSFLQTTMGVFLRDPKCALVQTPHHFFSPDPFERNL GTFREIPNEGNLFYGLVQSGNDLWNATFFCGSCAVLKRTALEEVGGVAVETVTEDAHTALKLHRRGYTSAYLPTVQAAGL ATESLAGHVKQRTRWARGMAQIFRIDNPFLGRGLGFIQRICYGNAMLHFFYGIPRLVFLTIPLAYLFFHLYFINASSIAL ASYVIPYLVLANVANSRMQGRYRHSFWAEVYESVLAWYIALPTTVAFLSPKHGKFNVTDKGGKIDEGYVDWSTSKPYLVL FALNVLAIAAGLWRLVADQGDEASTILITLGWTVYNLAMLGAALAVARETKQVRVTHRIAMRVPATLLLADGSTAACFTS DYSTGGLGLEAVPGLPLAIGDTLTVCVTRGDRPFPFPVRVSRVTPTHVGVSFEALTLEQERQLVQCTFGRADAWLDWHAS TRTDTPLRGLKEVLRVGLDGYVRMWKGVARGVQSMLAPKLDRARD >Mature_845_residues MKAAFASRWRATVRRATDWCARGIGLPAERTLLDWLVRLFFHAPPPGRPDPIRRRARTAFLWLAREWGVLQPLSPREWLW RAIVRAPRAAGEQPARDPLAWFDTFVVPVYVVVRALGARIGAQLERLPWARWGGWLDARANGVGRHRWLAPLLLCAGGLM WAAAAMSPLMPGAQFAFFAIVAVLALALRRLPGHLPTLALASLALLATLRYVWWRTTQTLDFRSPVEAVAGYLLYGAEAY TWMILLLGFVQTAWPLDRPIVPLPDDPDSWPSVDIYIPTYNEPLSVVKPTVFAAQSIDWPTGKLRVYLLDDGKRPEFAAF AREAGIGYLTRDDNLHAKAGNINRALPKTHGEYIAIFDCDHVPTRSFLQTTMGVFLRDPKCALVQTPHHFFSPDPFERNL GTFREIPNEGNLFYGLVQSGNDLWNATFFCGSCAVLKRTALEEVGGVAVETVTEDAHTALKLHRRGYTSAYLPTVQAAGL ATESLAGHVKQRTRWARGMAQIFRIDNPFLGRGLGFIQRICYGNAMLHFFYGIPRLVFLTIPLAYLFFHLYFINASSIAL ASYVIPYLVLANVANSRMQGRYRHSFWAEVYESVLAWYIALPTTVAFLSPKHGKFNVTDKGGKIDEGYVDWSTSKPYLVL FALNVLAIAAGLWRLVADQGDEASTILITLGWTVYNLAMLGAALAVARETKQVRVTHRIAMRVPATLLLADGSTAACFTS DYSTGGLGLEAVPGLPLAIGDTLTVCVTRGDRPFPFPVRVSRVTPTHVGVSFEALTLEQERQLVQCTFGRADAWLDWHAS TRTDTPLRGLKEVLRVGLDGYVRMWKGVARGVQSMLAPKLDRARD
Specific function: Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose, which is produced as an extracellular component for mechanical and chemical protection at the onset of the stationary phase, when the cells exhibit multic
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PilZ domain [H]
Homologues:
Organism=Escherichia coli, GI87082284, Length=777, Percent_Identity=48.1338481338481, Blast_Score=774, Evalue=0.0, Organism=Escherichia coli, GI1787259, Length=374, Percent_Identity=23.2620320855615, Blast_Score=73, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003919 - InterPro: IPR001173 - InterPro: IPR009875 [H]
Pfam domain/function: PF00535 Glycos_transf_2; PF07238 PilZ [H]
EC number: =2.4.1.12 [H]
Molecular weight: Translated: 94069; Mature: 94069
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAAFASRWRATVRRATDWCARGIGLPAERTLLDWLVRLFFHAPPPGRPDPIRRRARTAF CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LWLAREWGVLQPLSPREWLWRAIVRAPRAAGEQPARDPLAWFDTFVVPVYVVVRALGARI HHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GAQLERLPWARWGGWLDARANGVGRHRWLAPLLLCAGGLMWAAAAMSPLMPGAQFAFFAI HHHHHHCCHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VAVLALALRRLPGHLPTLALASLALLATLRYVWWRTTQTLDFRSPVEAVAGYLLYGAEAY HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHH TWMILLLGFVQTAWPLDRPIVPLPDDPDSWPSVDIYIPTYNEPLSVVKPTVFAAQSIDWP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCHHHHHCCCCCC TGKLRVYLLDDGKRPEFAAFAREAGIGYLTRDDNLHAKAGNINRALPKTHGEYIAIFDCD CCCEEEEEECCCCCCHHHHHHHHCCCEEEECCCCCEEECCCCCCCCCCCCCCEEEEEECC HVPTRSFLQTTMGVFLRDPKCALVQTPHHFFSPDPFERNLGTFREIPNEGNLFYGLVQSG CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHCCHHHHHCCCCCCEEEEEECCC NDLWNATFFCGSCAVLKRTALEEVGGVAVETVTEDAHTALKLHRRGYTSAYLPTVQAAGL CCCEEHHHHHCCHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHCCCCCHHCCCHHHHCC ATESLAGHVKQRTRWARGMAQIFRIDNPFLGRGLGFIQRICYGNAMLHFFYGIPRLVFLT HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPLAYLFFHLYFINASSIALASYVIPYLVLANVANSRMQGRYRHSFWAEVYESVLAWYIA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LPTTVAFLSPKHGKFNVTDKGGKIDEGYVDWSTSKPYLVLFALNVLAIAAGLWRLVADQG HHHHHHHCCCCCCEEEECCCCCCCCCCEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCC DEASTILITLGWTVYNLAMLGAALAVARETKQVRVTHRIAMRVPATLLLADGSTAACFTS CCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEC DYSTGGLGLEAVPGLPLAIGDTLTVCVTRGDRPFPFPVRVSRVTPTHVGVSFEALTLEQE CCCCCCCCCCCCCCCCEEECCEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEEHHH RQLVQCTFGRADAWLDWHASTRTDTPLRGLKEVLRVGLDGYVRMWKGVARGVQSMLAPKL HHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH DRARD HCCCC >Mature Secondary Structure MKAAFASRWRATVRRATDWCARGIGLPAERTLLDWLVRLFFHAPPPGRPDPIRRRARTAF CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LWLAREWGVLQPLSPREWLWRAIVRAPRAAGEQPARDPLAWFDTFVVPVYVVVRALGARI HHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GAQLERLPWARWGGWLDARANGVGRHRWLAPLLLCAGGLMWAAAAMSPLMPGAQFAFFAI HHHHHHCCHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VAVLALALRRLPGHLPTLALASLALLATLRYVWWRTTQTLDFRSPVEAVAGYLLYGAEAY HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHH TWMILLLGFVQTAWPLDRPIVPLPDDPDSWPSVDIYIPTYNEPLSVVKPTVFAAQSIDWP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCHHHHHCCCCCC TGKLRVYLLDDGKRPEFAAFAREAGIGYLTRDDNLHAKAGNINRALPKTHGEYIAIFDCD CCCEEEEEECCCCCCHHHHHHHHCCCEEEECCCCCEEECCCCCCCCCCCCCCEEEEEECC HVPTRSFLQTTMGVFLRDPKCALVQTPHHFFSPDPFERNLGTFREIPNEGNLFYGLVQSG CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHCCHHHHHCCCCCCEEEEEECCC NDLWNATFFCGSCAVLKRTALEEVGGVAVETVTEDAHTALKLHRRGYTSAYLPTVQAAGL CCCEEHHHHHCCHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHCCCCCHHCCCHHHHCC ATESLAGHVKQRTRWARGMAQIFRIDNPFLGRGLGFIQRICYGNAMLHFFYGIPRLVFLT HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPLAYLFFHLYFINASSIALASYVIPYLVLANVANSRMQGRYRHSFWAEVYESVLAWYIA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LPTTVAFLSPKHGKFNVTDKGGKIDEGYVDWSTSKPYLVLFALNVLAIAAGLWRLVADQG HHHHHHHCCCCCCEEEECCCCCCCCCCEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCC DEASTILITLGWTVYNLAMLGAALAVARETKQVRVTHRIAMRVPATLLLADGSTAACFTS CCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEC DYSTGGLGLEAVPGLPLAIGDTLTVCVTRGDRPFPFPVRVSRVTPTHVGVSFEALTLEQE CCCCCCCCCCCCCCCCEEECCEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEEHHH RQLVQCTFGRADAWLDWHASTRTDTPLRGLKEVLRVGLDGYVRMWKGVARGVQSMLAPKL HHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH DRARD HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]