| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351315
Identifier: 115351315
GI number: 115351315
Start: 1382407
End: 1383195
Strand: Direct
Name: 115351315
Synonym: Bamb_1262
Alternate gene names: NA
Gene position: 1382407-1383195 (Clockwise)
Preceding gene: 115351314
Following gene: 115351316
Centisome position: 38.87
GC content: 74.27
Gene sequence:
>789_bases ATGAAGACGATCGCCATCATCTCGACCACCGGCGGCGCGGGTCGCACGACGCTCGCCGGCGCGCTCGCGGTGCTGCTCGC GCGCCGCGGCCGGCCGGTCGTCGCGGTCGAGTTCGACGCGCAGAACCTGATGGGCGCGACGCTCGGGCTCGACACGCTGG CCGAACACGGGCTCGCGCACAGCCTTCTCGCGGATCCTGCCGACGCCGCGCCGTGGCACGCGCATACATGGCGCAATGCC GACGGCGTGCTGTTCGTGCCGTACGGGCAGGTCGACGCGGCAGGCGCCGCCGCCTGCGATGCGCGGCTCGCGGCGGAGCC GGACTGGCTGTCGCGTGCGCTCGACGAGATCGCGCTGCCGGCCGAGGGCGTCGTGCTGGTCGACACGGCCCGCTATCCGT CGCCGCAGGCCGAGCAGGCGATTCGCCGCGCCGACCTGACGCTCGTCGTCGTGCCGCCCGAACCGGCCGCGTGCGCGACC GTCGCCGCGCGCCTGGACGCGCTGCGTGCCGGCCGCGGCGACCTGCAGATCGTCGTGAACCGGCTGAACCCCGCGCGCGA CATGCAGCGCGATGCGCTCGCGATGCTGCGGGGCGTCGTGGGGCCGGAGTCGATGCTCGAGCAGCGCATTCACGTCGACG CGGCCGTGCCCGAAACGCTCGCGCGCGGCAGCTGGATCTTCGACGACGCGCCGTATTCGCAGGCGTCGCACGACCTGAAC GGCGTCGCGAACTGGGTCGATACGTGGCTCACGGCGGCCGCGGCCGGCCGTGCGGGAGCGTCGCGATGA
Upstream 100 bases:
>100_bases GGGGGCTGCACCGGCGCGACGCGGTGCCGTGCGAACTCGTGCCGATCGCGCTGCGCGGACGCCTGCTGCCCGACGCCGAG CGCACCGACGAGGCCGTGCG
Downstream 100 bases:
>100_bases AAGCCGCGTTCGCGTCGCGCTGGCGCGCCACGGTCCGACGTGCGACCGACTGGTGCGCGCGCGGAATCGGGCTGCCGGCC GAGCGCACGCTGCTCGACTG
Product: chromosome partitioning ATPase protein-like protein
Products: NA
Alternate protein names: Cellulose Biosynthesis Protein; ATPase Involved In Chromosome Partitioning-Like; Cellulose Synthase Operon Protein YhjQ; ATPase Involved In Chromosome Partitioning-Like Protein
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MKTIAIISTTGGAGRTTLAGALAVLLARRGRPVVAVEFDAQNLMGATLGLDTLAEHGLAHSLLADPADAAPWHAHTWRNA DGVLFVPYGQVDAAGAAACDARLAAEPDWLSRALDEIALPAEGVVLVDTARYPSPQAEQAIRRADLTLVVVPPEPAACAT VAARLDALRAGRGDLQIVVNRLNPARDMQRDALAMLRGVVGPESMLEQRIHVDAAVPETLARGSWIFDDAPYSQASHDLN GVANWVDTWLTAAAAGRAGASR
Sequences:
>Translated_262_residues MKTIAIISTTGGAGRTTLAGALAVLLARRGRPVVAVEFDAQNLMGATLGLDTLAEHGLAHSLLADPADAAPWHAHTWRNA DGVLFVPYGQVDAAGAAACDARLAAEPDWLSRALDEIALPAEGVVLVDTARYPSPQAEQAIRRADLTLVVVPPEPAACAT VAARLDALRAGRGDLQIVVNRLNPARDMQRDALAMLRGVVGPESMLEQRIHVDAAVPETLARGSWIFDDAPYSQASHDLN GVANWVDTWLTAAAAGRAGASR >Mature_262_residues MKTIAIISTTGGAGRTTLAGALAVLLARRGRPVVAVEFDAQNLMGATLGLDTLAEHGLAHSLLADPADAAPWHAHTWRNA DGVLFVPYGQVDAAGAAACDARLAAEPDWLSRALDEIALPAEGVVLVDTARYPSPQAEQAIRRADLTLVVVPPEPAACAT VAARLDALRAGRGDLQIVVNRLNPARDMQRDALAMLRGVVGPESMLEQRIHVDAAVPETLARGSWIFDDAPYSQASHDLN GVANWVDTWLTAAAAGRAGASR
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27465; Mature: 27465
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIAIISTTGGAGRTTLAGALAVLLARRGRPVVAVEFDAQNLMGATLGLDTLAEHGLAH CCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH SLLADPADAAPWHAHTWRNADGVLFVPYGQVDAAGAAACDARLAAEPDWLSRALDEIALP HHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCC AEGVVLVDTARYPSPQAEQAIRRADLTLVVVPPEPAACATVAARLDALRAGRGDLQIVVN CCCEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEHEE RLNPARDMQRDALAMLRGVVGPESMLEQRIHVDAAVPETLARGSWIFDDAPYSQASHDLN CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHCCCEEECCCCCCHHHHHHH GVANWVDTWLTAAAAGRAGASR HHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKTIAIISTTGGAGRTTLAGALAVLLARRGRPVVAVEFDAQNLMGATLGLDTLAEHGLAH CCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH SLLADPADAAPWHAHTWRNADGVLFVPYGQVDAAGAAACDARLAAEPDWLSRALDEIALP HHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCC AEGVVLVDTARYPSPQAEQAIRRADLTLVVVPPEPAACATVAARLDALRAGRGDLQIVVN CCCEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEHEE RLNPARDMQRDALAMLRGVVGPESMLEQRIHVDAAVPETLARGSWIFDDAPYSQASHDLN CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHCCCEEECCCCCCHHHHHHH GVANWVDTWLTAAAAGRAGASR HHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA