Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351308

Identifier: 115351308

GI number: 115351308

Start: 1371392

End: 1371844

Strand: Direct

Name: 115351308

Synonym: Bamb_1255

Alternate gene names: NA

Gene position: 1371392-1371844 (Clockwise)

Preceding gene: 115351307

Following gene: 115351311

Centisome position: 38.56

GC content: 75.72

Gene sequence:

>453_bases
ATGCGCGACCCGTCCGCACCGTTCCGGATCGCCGCCGCGCGCGGTGCGCTCGATGCGGGCGCGTGGGCGATCGCGGCCGC
GTTGGCCGCGGCCGGCGCCGGGTGGTGGATCGCGTCGGGCTGGGCGCCGGCGACGATCGCGCGCGTGCTGCTGGCCGTGG
TCAGTACCGGGTCGGGGATTGCCGCGCTGTGGTACGCGGTGCGCATCGAGATCGACCGCCGGCTGTTCGCCGCGCTGGCG
CGGGCGGCGTCGTGCGATGCGTCGGTCGACGACGGGCTCGCCGCGCTCGATCGCGCGCTTGTCGAGCTCGGCTGGATCGA
TGCAGGGAAGGCCGGACGCGCTTTGGACGACCGCGTGCGCGGCGCGGTCGGGCTGTGCCGTGCCGCCGTGCTGGTCGCGA
TCGTGCAGTGGATCGTGGTCGGGCTGGCGATCGCGGTGCCGCGGGTGGGTTAG

Upstream 100 bases:

>100_bases
CGGCGGTACGGGCGGTGCGGCCGCGCGCGGTATGGTCGGACGACGGCGTGGCCGTGCTGCAGGACTGGATCGACCGCCGC
CGCGTGACGGGAGGGCCGTG

Downstream 100 bases:

>100_bases
TCGTGCGTGCGTGGCCCGGGCGGCCAGACGCGATCTGAGTCACGCGTCACACCTGCGCCTCCCGCCGCGTCCGCGTGCGC
TTCACCTCGTACATCTCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MRDPSAPFRIAAARGALDAGAWAIAAALAAAGAGWWIASGWAPATIARVLLAVVSTGSGIAALWYAVRIEIDRRLFAALA
RAASCDASVDDGLAALDRALVELGWIDAGKAGRALDDRVRGAVGLCRAAVLVAIVQWIVVGLAIAVPRVG

Sequences:

>Translated_150_residues
MRDPSAPFRIAAARGALDAGAWAIAAALAAAGAGWWIASGWAPATIARVLLAVVSTGSGIAALWYAVRIEIDRRLFAALA
RAASCDASVDDGLAALDRALVELGWIDAGKAGRALDDRVRGAVGLCRAAVLVAIVQWIVVGLAIAVPRVG
>Mature_150_residues
MRDPSAPFRIAAARGALDAGAWAIAAALAAAGAGWWIASGWAPATIARVLLAVVSTGSGIAALWYAVRIEIDRRLFAALA
RAASCDASVDDGLAALDRALVELGWIDAGKAGRALDDRVRGAVGLCRAAVLVAIVQWIVVGLAIAVPRVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15281; Mature: 15281

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDPSAPFRIAAARGALDAGAWAIAAALAAAGAGWWIASGWAPATIARVLLAVVSTGSGI
CCCCCCCEEHHHHHCCCCHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHCCCCH
AALWYAVRIEIDRRLFAALARAASCDASVDDGLAALDRALVELGWIDAGKAGRALDDRVR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
GAVGLCRAAVLVAIVQWIVVGLAIAVPRVG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRDPSAPFRIAAARGALDAGAWAIAAALAAAGAGWWIASGWAPATIARVLLAVVSTGSGI
CCCCCCCEEHHHHHCCCCHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHCCCCH
AALWYAVRIEIDRRLFAALARAASCDASVDDGLAALDRALVELGWIDAGKAGRALDDRVR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
GAVGLCRAAVLVAIVQWIVVGLAIAVPRVG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA