Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351181

Identifier: 115351181

GI number: 115351181

Start: 1237330

End: 1238007

Strand: Direct

Name: 115351181

Synonym: Bamb_1128

Alternate gene names: NA

Gene position: 1237330-1238007 (Clockwise)

Preceding gene: 115351180

Following gene: 115351182

Centisome position: 34.79

GC content: 69.47

Gene sequence:

>678_bases
GTGTGCACTCACTACCGCGCCCCCGATGAAGACCCGGGCATCAGCGAGCTGAAGCTCGGCATCGGCGACCTGTTTCGCCG
CGATCCGTGGGAACCCGACGTGTATCCCGACTACGTGGCGCCCATCGCGCGTGCCGACGGCGACGGCCTCGCGGTCGTCA
GCGCGGTGTTCGGCTTCTGGCCGAAGTTCATGCAGCCCGTGCGTGTCGACGAGAACGGCCGCAAGCGCAAGAAGCTCGAT
ACGGTGAACGCGCGCGCGGAAACGGTCGGCTCGTCGCGGCTCTACGGCACCGCCTGGCGCAACGGCCAGCGTTGCCTGAT
TCCTGTGCGCTGGATTTTCGAGCCGTGTTACGAGACGGGCCGCAACGTGTGGCACCGGATCGGCGTCGACGGCTGGCAGC
CGTGCTGCGTCGCCGGCATCTGGCGCAGCTTCGTCACCGCCGACGGCCGCGAGCGAATCGGCATGACGATGCTCACGGTC
AACGCCGACGATCACCCCGTGTTCGCGCGCATGCATCGGCCCGGCGACGAGAAGCGGGGCGTCGTGATCCTGCGCCGCGA
CGACTACGACGCATGGCTGCACGCGCGCGACGTCGAAGCCGTGCGGCGCTTGCTGACGCTCCTTCCCTCCGACGACCTGG
TGGCCGAGCCCGAGCCGGCGTCGCCCGCCGGCACCTGA

Upstream 100 bases:

>100_bases
CTTGCACACGCAAGACTGTTTCGTCATACCAACCGATTGCACAAACACGGCGTGCACGCTGACCTACGATGAAGACATCG
CGTCCATCGTCTGCCGAACC

Downstream 100 bases:

>100_bases
GCTTTCATTTCTCCTACGCGCGACCGGCGACTCCGCAGGTCGGACGCGTGCCGTTTTCCGACACGTTTCATAAATCGTCG
AACACCCGGGAAATCACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MCTHYRAPDEDPGISELKLGIGDLFRRDPWEPDVYPDYVAPIARADGDGLAVVSAVFGFWPKFMQPVRVDENGRKRKKLD
TVNARAETVGSSRLYGTAWRNGQRCLIPVRWIFEPCYETGRNVWHRIGVDGWQPCCVAGIWRSFVTADGRERIGMTMLTV
NADDHPVFARMHRPGDEKRGVVILRRDDYDAWLHARDVEAVRRLLTLLPSDDLVAEPEPASPAGT

Sequences:

>Translated_225_residues
MCTHYRAPDEDPGISELKLGIGDLFRRDPWEPDVYPDYVAPIARADGDGLAVVSAVFGFWPKFMQPVRVDENGRKRKKLD
TVNARAETVGSSRLYGTAWRNGQRCLIPVRWIFEPCYETGRNVWHRIGVDGWQPCCVAGIWRSFVTADGRERIGMTMLTV
NADDHPVFARMHRPGDEKRGVVILRRDDYDAWLHARDVEAVRRLLTLLPSDDLVAEPEPASPAGT
>Mature_225_residues
MCTHYRAPDEDPGISELKLGIGDLFRRDPWEPDVYPDYVAPIARADGDGLAVVSAVFGFWPKFMQPVRVDENGRKRKKLD
TVNARAETVGSSRLYGTAWRNGQRCLIPVRWIFEPCYETGRNVWHRIGVDGWQPCCVAGIWRSFVTADGRERIGMTMLTV
NADDHPVFARMHRPGDEKRGVVILRRDDYDAWLHARDVEAVRRLLTLLPSDDLVAEPEPASPAGT

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25473; Mature: 25473

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCTHYRAPDEDPGISELKLGIGDLFRRDPWEPDVYPDYVAPIARADGDGLAVVSAVFGFW
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
PKFMQPVRVDENGRKRKKLDTVNARAETVGSSRLYGTAWRNGQRCLIPVRWIFEPCYETG
HHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEHHHHHHHHHHHH
RNVWHRIGVDGWQPCCVAGIWRSFVTADGRERIGMTMLTVNADDHPVFARMHRPGDEKRG
HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHCCEEEEEECCCCCCEEEEECCCCCCCCC
VVILRRDDYDAWLHARDVEAVRRLLTLLPSDDLVAEPEPASPAGT
EEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCTHYRAPDEDPGISELKLGIGDLFRRDPWEPDVYPDYVAPIARADGDGLAVVSAVFGFW
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
PKFMQPVRVDENGRKRKKLDTVNARAETVGSSRLYGTAWRNGQRCLIPVRWIFEPCYETG
HHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEHHHHHHHHHHHH
RNVWHRIGVDGWQPCCVAGIWRSFVTADGRERIGMTMLTVNADDHPVFARMHRPGDEKRG
HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHCCEEEEEECCCCCCEEEEECCCCCCCCC
VVILRRDDYDAWLHARDVEAVRRLLTLLPSDDLVAEPEPASPAGT
EEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA