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The map label for this gene is argD

Identifier: 115351115

GI number: 115351115

Start: 1151938

End: 1153170

Strand: Direct

Name: argD

Synonym: Bamb_1061

Alternate gene names: 115351115

Gene position: 1151938-1153170 (Clockwise)

Preceding gene: 115351111

Following gene: 115351116

Centisome position: 32.39

GC content: 67.07

Gene sequence:

>1233_bases
ATGACGACCTCGACCGTGACCCGCCAGACATTCGACGAAGTGATGGTGCCGGTATTCTCCCCCGCGCCGTTCGTGCCGGA
CCGTGCAGAGGGCTCCCGCGTGTGGGACACGGCCGGCCGCGAATACGTGGATTTCGCGTGCGGCATCGCGGTGACGTCGC
TGGGTCACGGCCACCCGGAACTGCTGAAAGTCCTGGACGAACAAGGCCGCAAGCTCTGGCACATCGGCAACGGCTACACG
AACGAACCGGTGCTGCGCCTCGCGAAGCGCCTCGAATCGCTGACCTTCGCCGACCGCGCATTCTTCGCGAACTCGGGCGC
GGAAGCGAACGAAGCCGCGCTGAAGCTCGCGCGCCGCGTCGCATTCGACCGCCACGGCGCCGACAAATACGAAATCGTAT
CGTTCGTCCAGTCGTTCCACGGCCGCACGTTCTTCACGGTCAGCGTCGGCGGCCAGCCGAAATACTCGGAAGGCTTCGGC
CCGGTGCCGGCCGGCATCAAGCACCTGCCGTTCAACGACATCGGAGCCGCCAAGGCCGCGATCGGCCCGCAAACCTGCGC
GGTGATCGTCGAGCCGGTGCAGGGCGAAGGCGGCGTGATCCCGGCCGATCCGGCCTTCCTGAAAGCACTGCGCGAAGCCT
GCGACGCGCACGACGCAGTGCTGATCTTCGACGAAGTGCAAACGGGCGTCGGCCGCACGGGCCAGTTCTACGCCTACATG
GACACGGGCGTCACGCCGGACATCCTCACGACCGCGAAGGCGCTCGGCAACGGCTTCCCGATCGGCGCGATGCTGACGAC
GAACGAGCTGGCCGCGCACTTCAAGGTCGGCGTGCACGGCACGACGTACGGCGGCAACCCGCTCGCGTCGGCAATCGCGG
ACAAGGTCGTCGAACTGGTCGGCGACCCGGCACTGCTCGAAGGCGTGCGCGAACGCAGCGTGCGACTGAAGGGCGCGCTC
GAACGCATCAACGCACGCTTCGGCATCTTCAAGGACATCCGCGGCAAGGGCCTGCTGGTCGGCGCGGAACTGACCGCCGC
CTTCGACGGCCGCGCGAAGGACTTCGTCACGGCCGCCGCCGAGAACGGCCTGATCATGCTGATCGCAGGCCCGAACGTGC
TGCGTTTCGTGCCGTCGCTCGTGATTCCGTTCGACCTGCTCGACGAAGGCATGAAGCGCTTCGAGAAGGCAGTCGAACAG
GTGCTCGCGCCCCAGGAAGCCACCGCGCGCTGA

Upstream 100 bases:

>100_bases
CGCTTCCGATAGAACCCGTCGCAAATCCGCAAGACGCTTGCGTCACCCTTACCTAAACTTGATCCTGTTGAACCCTCTTA
CGAAACCGAAAGGAACGACC

Downstream 100 bases:

>100_bases
TCGGCGCACCCATCGCAGACAGGAACGACGATGCTATTTGTTCGCCCCGGCAAACTCACGGATCTGGATGCGCTCGCGCA
CATGGCGCGCACCGCGCAGC

Product: bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein

Products: NA

Alternate protein names: ACOAT [H]

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MTTSTVTRQTFDEVMVPVFSPAPFVPDRAEGSRVWDTAGREYVDFACGIAVTSLGHGHPELLKVLDEQGRKLWHIGNGYT
NEPVLRLAKRLESLTFADRAFFANSGAEANEAALKLARRVAFDRHGADKYEIVSFVQSFHGRTFFTVSVGGQPKYSEGFG
PVPAGIKHLPFNDIGAAKAAIGPQTCAVIVEPVQGEGGVIPADPAFLKALREACDAHDAVLIFDEVQTGVGRTGQFYAYM
DTGVTPDILTTAKALGNGFPIGAMLTTNELAAHFKVGVHGTTYGGNPLASAIADKVVELVGDPALLEGVRERSVRLKGAL
ERINARFGIFKDIRGKGLLVGAELTAAFDGRAKDFVTAAAENGLIMLIAGPNVLRFVPSLVIPFDLLDEGMKRFEKAVEQ
VLAPQEATAR

Sequences:

>Translated_410_residues
MTTSTVTRQTFDEVMVPVFSPAPFVPDRAEGSRVWDTAGREYVDFACGIAVTSLGHGHPELLKVLDEQGRKLWHIGNGYT
NEPVLRLAKRLESLTFADRAFFANSGAEANEAALKLARRVAFDRHGADKYEIVSFVQSFHGRTFFTVSVGGQPKYSEGFG
PVPAGIKHLPFNDIGAAKAAIGPQTCAVIVEPVQGEGGVIPADPAFLKALREACDAHDAVLIFDEVQTGVGRTGQFYAYM
DTGVTPDILTTAKALGNGFPIGAMLTTNELAAHFKVGVHGTTYGGNPLASAIADKVVELVGDPALLEGVRERSVRLKGAL
ERINARFGIFKDIRGKGLLVGAELTAAFDGRAKDFVTAAAENGLIMLIAGPNVLRFVPSLVIPFDLLDEGMKRFEKAVEQ
VLAPQEATAR
>Mature_409_residues
TTSTVTRQTFDEVMVPVFSPAPFVPDRAEGSRVWDTAGREYVDFACGIAVTSLGHGHPELLKVLDEQGRKLWHIGNGYTN
EPVLRLAKRLESLTFADRAFFANSGAEANEAALKLARRVAFDRHGADKYEIVSFVQSFHGRTFFTVSVGGQPKYSEGFGP
VPAGIKHLPFNDIGAAKAAIGPQTCAVIVEPVQGEGGVIPADPAFLKALREACDAHDAVLIFDEVQTGVGRTGQFYAYMD
TGVTPDILTTAKALGNGFPIGAMLTTNELAAHFKVGVHGTTYGGNPLASAIADKVVELVGDPALLEGVRERSVRLKGALE
RINARFGIFKDIRGKGLLVGAELTAAFDGRAKDFVTAAAENGLIMLIAGPNVLRFVPSLVIPFDLLDEGMKRFEKAVEQV
LAPQEATAR

Specific function: Catalyzes The Transmination Of N(2)-Succinylornithine And Alpha-Ketoglutarate Into N(2)-Succinylglutamate Semialdehyde And Glutamate. Can Also Act As A Acetylornithine Aminotransferase. [C]

COG id: COG4992

COG function: function code E; Ornithine/acetylornithine aminotransferase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily [H]

Homologues:

Organism=Homo sapiens, GI4557809, Length=384, Percent_Identity=33.3333333333333, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI284507298, Length=299, Percent_Identity=35.7859531772575, Blast_Score=182, Evalue=7e-46,
Organism=Homo sapiens, GI13994255, Length=439, Percent_Identity=29.3849658314351, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI37574042, Length=426, Percent_Identity=26.7605633802817, Blast_Score=129, Evalue=4e-30,
Organism=Homo sapiens, GI24119277, Length=396, Percent_Identity=27.020202020202, Blast_Score=119, Evalue=6e-27,
Organism=Homo sapiens, GI226442705, Length=426, Percent_Identity=25.8215962441315, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI226442709, Length=391, Percent_Identity=26.5984654731458, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI188536080, Length=414, Percent_Identity=22.2222222222222, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI38679950, Length=414, Percent_Identity=22.2222222222222, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI38679946, Length=414, Percent_Identity=22.2222222222222, Blast_Score=80, Evalue=5e-15,
Organism=Escherichia coli, GI1788044, Length=398, Percent_Identity=60.3015075376884, Blast_Score=506, Evalue=1e-145,
Organism=Escherichia coli, GI1789759, Length=402, Percent_Identity=56.9651741293532, Blast_Score=489, Evalue=1e-139,
Organism=Escherichia coli, GI1789016, Length=406, Percent_Identity=34.4827586206897, Blast_Score=210, Evalue=1e-55,
Organism=Escherichia coli, GI1787560, Length=403, Percent_Identity=33.4987593052109, Blast_Score=180, Evalue=2e-46,
Organism=Escherichia coli, GI145693181, Length=321, Percent_Identity=35.202492211838, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1786991, Length=327, Percent_Identity=31.4984709480122, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1786349, Length=340, Percent_Identity=31.7647058823529, Blast_Score=110, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI25144271, Length=388, Percent_Identity=34.020618556701, Blast_Score=223, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI32564660, Length=430, Percent_Identity=30, Blast_Score=176, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI25144274, Length=258, Percent_Identity=34.4961240310078, Blast_Score=152, Evalue=4e-37,
Organism=Caenorhabditis elegans, GI71992977, Length=432, Percent_Identity=28.0092592592593, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI17541228, Length=437, Percent_Identity=27.2311212814645, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71981843, Length=182, Percent_Identity=31.8681318681319, Blast_Score=99, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6324432, Length=398, Percent_Identity=39.6984924623116, Blast_Score=281, Evalue=1e-76,
Organism=Saccharomyces cerevisiae, GI6323470, Length=402, Percent_Identity=32.089552238806, Blast_Score=192, Evalue=8e-50,
Organism=Saccharomyces cerevisiae, GI6324386, Length=316, Percent_Identity=27.8481012658228, Blast_Score=102, Evalue=1e-22,
Organism=Drosophila melanogaster, GI21357415, Length=384, Percent_Identity=31.7708333333333, Blast_Score=205, Evalue=5e-53,
Organism=Drosophila melanogaster, GI28574759, Length=411, Percent_Identity=29.4403892944039, Blast_Score=178, Evalue=5e-45,
Organism=Drosophila melanogaster, GI161085790, Length=426, Percent_Identity=28.6384976525822, Blast_Score=177, Evalue=9e-45,
Organism=Drosophila melanogaster, GI21356575, Length=429, Percent_Identity=28.4382284382284, Blast_Score=143, Evalue=2e-34,
Organism=Drosophila melanogaster, GI281366494, Length=439, Percent_Identity=23.4624145785877, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24667139, Length=439, Percent_Identity=23.4624145785877, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24667143, Length=439, Percent_Identity=23.4624145785877, Blast_Score=90, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004636
- InterPro:   IPR005814
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422
- InterPro:   IPR017652 [H]

Pfam domain/function: PF00202 Aminotran_3 [H]

EC number: =2.6.1.11 [H]

Molecular weight: Translated: 43882; Mature: 43750

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00600 AA_TRANSFER_CLASS_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSTVTRQTFDEVMVPVFSPAPFVPDRAEGSRVWDTAGREYVDFACGIAVTSLGHGHPE
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCHH
LLKVLDEQGRKLWHIGNGYTNEPVLRLAKRLESLTFADRAFFANSGAEANEAALKLARRV
HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AFDRHGADKYEIVSFVQSFHGRTFFTVSVGGQPKYSEGFGPVPAGIKHLPFNDIGAAKAA
HHHCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
IGPQTCAVIVEPVQGEGGVIPADPAFLKALREACDAHDAVLIFDEVQTGVGRTGQFYAYM
CCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCEEEEE
DTGVTPDILTTAKALGNGFPIGAMLTTNELAAHFKVGVHGTTYGGNPLASAIADKVVELV
CCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHEEEECCEECCCCCHHHHHHHHHHHHHH
GDPALLEGVRERSVRLKGALERINARFGIFKDIRGKGLLVGAELTAAFDGRAKDFVTAAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCEEEEECEEHHHCCCCHHHHHHHHC
ENGLIMLIAGPNVLRFVPSLVIPFDLLDEGMKRFEKAVEQVLAPQEATAR
CCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure 
TTSTVTRQTFDEVMVPVFSPAPFVPDRAEGSRVWDTAGREYVDFACGIAVTSLGHGHPE
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCHH
LLKVLDEQGRKLWHIGNGYTNEPVLRLAKRLESLTFADRAFFANSGAEANEAALKLARRV
HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AFDRHGADKYEIVSFVQSFHGRTFFTVSVGGQPKYSEGFGPVPAGIKHLPFNDIGAAKAA
HHHCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
IGPQTCAVIVEPVQGEGGVIPADPAFLKALREACDAHDAVLIFDEVQTGVGRTGQFYAYM
CCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCEEEEE
DTGVTPDILTTAKALGNGFPIGAMLTTNELAAHFKVGVHGTTYGGNPLASAIADKVVELV
CCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHEEEECCEECCCCCHHHHHHHHHHHHHH
GDPALLEGVRERSVRLKGALERINARFGIFKDIRGKGLLVGAELTAAFDGRAKDFVTAAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCEEEEECEEHHHCCCCHHHHHHHHC
ENGLIMLIAGPNVLRFVPSLVIPFDLLDEGMKRFEKAVEQVLAPQEATAR
CCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]