Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351096

Identifier: 115351096

GI number: 115351096

Start: 1131525

End: 1131764

Strand: Direct

Name: 115351096

Synonym: Bamb_1042

Alternate gene names: NA

Gene position: 1131525-1131764 (Clockwise)

Preceding gene: 115351094

Following gene: 115351097

Centisome position: 31.82

GC content: 64.58

Gene sequence:

>240_bases
TTGCCGCGCGCGGCGGGAGGTGCGATCATTCGACAACCGACCTGCGCGGCGCGCAAGCCCCGCATGTCGACAGCAACCCG
AATGGGCGGGAGCGACCAGCTTGATGCCGATGTCGCGCGCAAGCGCGAATATCGGTCGATCGCGAACCACGGGACCGGTA
GGCGCCGATGCGCGTGCCTCGGTCAACAGGAGATCCGTGTGGCGATCATCAGTCGTCGGATGACTTGTGACGCAGTATAA

Upstream 100 bases:

>100_bases
TGCAGCTCGACGATGCGCGGCGTGTCGTGGGAAGGCGAGGCAGTGACGGCGTTCATGGCGGCGATGGCGAAAGAGTGGGC
GATGCCGTGCGGCAAAATCT

Downstream 100 bases:

>100_bases
TGAATCATCGGCGTTCGCTCAAACCCCGCGTAAACCCTCGGCTCACATTACGATCATTCAAAAAGGAACCGGCCTCATGT
CCGTGCCCACGCTTCCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MPRAAGGAIIRQPTCAARKPRMSTATRMGGSDQLDADVARKREYRSIANHGTGRRRCACLGQQEIRVAIISRRMTCDAV

Sequences:

>Translated_79_residues
MPRAAGGAIIRQPTCAARKPRMSTATRMGGSDQLDADVARKREYRSIANHGTGRRRCACLGQQEIRVAIISRRMTCDAV
>Mature_78_residues
PRAAGGAIIRQPTCAARKPRMSTATRMGGSDQLDADVARKREYRSIANHGTGRRRCACLGQQEIRVAIISRRMTCDAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8644; Mature: 8513

Theoretical pI: Translated: 11.77; Mature: 11.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
10.1 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRAAGGAIIRQPTCAARKPRMSTATRMGGSDQLDADVARKREYRSIANHGTGRRRCACL
CCCCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHC
GQQEIRVAIISRRMTCDAV
CCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PRAAGGAIIRQPTCAARKPRMSTATRMGGSDQLDADVARKREYRSIANHGTGRRRCACL
CCCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHC
GQQEIRVAIISRRMTCDAV
CCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA