Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351093

Identifier: 115351093

GI number: 115351093

Start: 1128599

End: 1129399

Strand: Direct

Name: 115351093

Synonym: Bamb_1039

Alternate gene names: NA

Gene position: 1128599-1129399 (Clockwise)

Preceding gene: 115351092

Following gene: 115351094

Centisome position: 31.73

GC content: 72.16

Gene sequence:

>801_bases
TTGGCGAGAACGAAAACGACGCGCGCAGCGCCGGCCCCCGGCGCCGGCGTGATCTTCGCATTGCGCGCGATCGGGCTCGT
GCTGTTCGCGCGCTGGCTGTTCTCGATGTCCCAGATGGGCTATCGCGCGTCGCTGTCGGCGATGGTGTCGTCGCCGTGGG
CGTTCGTCTATCTAGTGCTGATCTTCCTGCTGCTCGCGCTGCCGGGCGCCGCCGCGCGCGCCGAACGGCCGTTCCATCCG
CTGCCGCAGTGGCTGCGCCAGGCGCTGCGCGTGTTCGCGCTGATCGGTTTCCTGTTTGCCGTCTGGTCGATCGGCGCGTT
CGCGTGGGCGGCCGGCTGGCGTTCTGCGCTGCACGCGGTGACGGCGACCAACGGCTGGCTGATCGCCGCGCCGGCGCTGT
ATGCGGCGATCGTGTGGATGTGCCGGCCGCGGCCGCTGTGGCGGACCAACGTGGCCGCGCGCCGTTTCGCGGTCGGCCGC
TACGCGATCTCGCTCGATACGCTCACCCGTACCGCGATCGTCTGGATGGAGAGCCGCAAGGTCGGCCAGTACGACGCGCG
CGAACTCTCCGTGCGCTGGCCCGGCCAGGTTGCGCCGGCAGCGGGCGAGCCGGGTGCGCAGCCGGCCGCCGTGCCGCCGC
GTCGCGGCAGCCTGTTCCGGCGGCCGAAGGTCGAGCTGCTGTGGGATTCGCCGGCGGCCGTCGGCCATAACCGGCAGATC
GTGATGCGCGCGCCGCTCGTGACCGAGGGCGACCGCGTCGCGGTGCTCGCGCTCGACGCGGCGCTCAAGCAGATCGTCTG
A

Upstream 100 bases:

>100_bases
GGGCCGGCACGCCATCCGGCAATCTGTCCAGACGGTAATGTCCCTATAATGGCCGTGCCGTGAAATCCGGCCCTGCACGA
ACATCGAGAGGAGAGCAGTC

Downstream 100 bases:

>100_bases
CAAGGCCTGCGCGGCGCGCGGGCGACAAGGAGGCGCAATGATCGTCCGCTGGTTGCTGGCAGCCGTTCACCTGATGGCGT
TTGGCGTCGCGTTCGCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MARTKTTRAAPAPGAGVIFALRAIGLVLFARWLFSMSQMGYRASLSAMVSSPWAFVYLVLIFLLLALPGAAARAERPFHP
LPQWLRQALRVFALIGFLFAVWSIGAFAWAAGWRSALHAVTATNGWLIAAPALYAAIVWMCRPRPLWRTNVAARRFAVGR
YAISLDTLTRTAIVWMESRKVGQYDARELSVRWPGQVAPAAGEPGAQPAAVPPRRGSLFRRPKVELLWDSPAAVGHNRQI
VMRAPLVTEGDRVAVLALDAALKQIV

Sequences:

>Translated_266_residues
MARTKTTRAAPAPGAGVIFALRAIGLVLFARWLFSMSQMGYRASLSAMVSSPWAFVYLVLIFLLLALPGAAARAERPFHP
LPQWLRQALRVFALIGFLFAVWSIGAFAWAAGWRSALHAVTATNGWLIAAPALYAAIVWMCRPRPLWRTNVAARRFAVGR
YAISLDTLTRTAIVWMESRKVGQYDARELSVRWPGQVAPAAGEPGAQPAAVPPRRGSLFRRPKVELLWDSPAAVGHNRQI
VMRAPLVTEGDRVAVLALDAALKQIV
>Mature_265_residues
ARTKTTRAAPAPGAGVIFALRAIGLVLFARWLFSMSQMGYRASLSAMVSSPWAFVYLVLIFLLLALPGAAARAERPFHPL
PQWLRQALRVFALIGFLFAVWSIGAFAWAAGWRSALHAVTATNGWLIAAPALYAAIVWMCRPRPLWRTNVAARRFAVGRY
AISLDTLTRTAIVWMESRKVGQYDARELSVRWPGQVAPAAGEPGAQPAAVPPRRGSLFRRPKVELLWDSPAAVGHNRQIV
MRAPLVTEGDRVAVLALDAALKQIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29147; Mature: 29015

Theoretical pI: Translated: 12.21; Mature: 12.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTKTTRAAPAPGAGVIFALRAIGLVLFARWLFSMSQMGYRASLSAMVSSPWAFVYLVL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHH
IFLLLALPGAAARAERPFHPLPQWLRQALRVFALIGFLFAVWSIGAFAWAAGWRSALHAV
HHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TATNGWLIAAPALYAAIVWMCRPRPLWRTNVAARRFAVGRYAISLDTLTRTAIVWMESRK
HCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEHHHHHHHHHEEEECCC
VGQYDARELSVRWPGQVAPAAGEPGAQPAAVPPRRGSLFRRPKVELLWDSPAAVGHNRQI
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEE
VMRAPLVTEGDRVAVLALDAALKQIV
EEECCCCCCCCEEEEEEHHHHHHHCC
>Mature Secondary Structure 
ARTKTTRAAPAPGAGVIFALRAIGLVLFARWLFSMSQMGYRASLSAMVSSPWAFVYLVL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHH
IFLLLALPGAAARAERPFHPLPQWLRQALRVFALIGFLFAVWSIGAFAWAAGWRSALHAV
HHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TATNGWLIAAPALYAAIVWMCRPRPLWRTNVAARRFAVGRYAISLDTLTRTAIVWMESRK
HCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEHHHHHHHHHEEEECCC
VGQYDARELSVRWPGQVAPAAGEPGAQPAAVPPRRGSLFRRPKVELLWDSPAAVGHNRQI
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEE
VMRAPLVTEGDRVAVLALDAALKQIV
EEECCCCCCCCEEEEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA