Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

Click here to switch to the map view.

The map label for this gene is acpS

Identifier: 115351068

GI number: 115351068

Start: 1102682

End: 1103122

Strand: Direct

Name: acpS

Synonym: Bamb_1014

Alternate gene names: 115351068

Gene position: 1102682-1103122 (Clockwise)

Preceding gene: 115351067

Following gene: 115351069

Centisome position: 31.0

GC content: 70.52

Gene sequence:

>441_bases
ATGGCGATCTACGGCATCGGCACCGACGTCGTCCAGATAAGCCGCATCGCGGCCGTGCTCGAGCGCACGGGCGGCCGGTT
TGCCGAGAAGGTGCTGGGCCCCGACGAGCTGCGCGTGTTCCACGCGCGCCGCGCGCGCTCCGAGGCGCGCGGCATCGCGT
TCCTCGCGACGCGCTTTTCCGCGAAGGAAGCGTTCTCGAAGGCGATCGGGCTCGGCATGCACTGGCCGATGACCTGGCGC
GCACTGCAGACCCTCAACCAGCGCAGCGGCGAACCGTACGTCGTCGCATCGGGCGAGTTGGCCGACTGGCTCGCCGCGCG
CGGCATCACCGCACGCGTGACGGTCAGCGACGAACGCGACTACGCGGTGTCGTTCGTGGTCACCGAGACCGACGCCGCGC
CGCCGCCCGCACCCGCACCTGTTTCCCGAACCACTTCCTGA

Upstream 100 bases:

>100_bases
TGTCGCAGCGCTGCACGGCGGCGCGCGCTGACGATGCATTTCCTCCGCGCGCGCTTCGCCCGCCACCCGGCATCGTCCGC
GTATCACGGCGGGCGCTGAC

Downstream 100 bases:

>100_bases
CGGACTTCCCGATTCGATGAAAACGACTCCCGGCCCGGTCATGCTCGACGTCGTCGGCACGGCCCTGTCGCGCGACGATG
CGCGGCGCCTTGCCCATCCG

Product: 4'-phosphopantetheinyl transferase

Products: NA

Alternate protein names: Holo-ACP synthase; 4'-phosphopantetheinyl transferase AcpS [H]

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MAIYGIGTDVVQISRIAAVLERTGGRFAEKVLGPDELRVFHARRARSEARGIAFLATRFSAKEAFSKAIGLGMHWPMTWR
ALQTLNQRSGEPYVVASGELADWLAARGITARVTVSDERDYAVSFVVTETDAAPPPAPAPVSRTTS

Sequences:

>Translated_146_residues
MAIYGIGTDVVQISRIAAVLERTGGRFAEKVLGPDELRVFHARRARSEARGIAFLATRFSAKEAFSKAIGLGMHWPMTWR
ALQTLNQRSGEPYVVASGELADWLAARGITARVTVSDERDYAVSFVVTETDAAPPPAPAPVSRTTS
>Mature_145_residues
AIYGIGTDVVQISRIAAVLERTGGRFAEKVLGPDELRVFHARRARSEARGIAFLATRFSAKEAFSKAIGLGMHWPMTWRA
LQTLNQRSGEPYVVASGELADWLAARGITARVTVSDERDYAVSFVVTETDAAPPPAPAPVSRTTS

Specific function: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein [H]

COG id: COG0736

COG function: function code I; Phosphopantetheinyl transferase (holo-ACP synthase)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the P-Pant transferase superfamily. AcpS family [H]

Homologues:

Organism=Escherichia coli, GI1788916, Length=131, Percent_Identity=35.8778625954198, Blast_Score=82, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008278
- InterPro:   IPR002582
- InterPro:   IPR004568
- ProDom:   PD004282 [H]

Pfam domain/function: PF01648 ACPS [H]

EC number: =2.7.8.7 [H]

Molecular weight: Translated: 15817; Mature: 15686

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIYGIGTDVVQISRIAAVLERTGGRFAEKVLGPDELRVFHARRARSEARGIAFLATRFS
CEEEECCHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEHHHHH
AKEAFSKAIGLGMHWPMTWRALQTLNQRSGEPYVVASGELADWLAARGITARVTVSDERD
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHCCCEEEEEECCCCC
YAVSFVVTETDAAPPPAPAPVSRTTS
EEEEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AIYGIGTDVVQISRIAAVLERTGGRFAEKVLGPDELRVFHARRARSEARGIAFLATRFS
EEEECCHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEHHHHH
AKEAFSKAIGLGMHWPMTWRALQTLNQRSGEPYVVASGELADWLAARGITARVTVSDERD
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHCCCEEEEEECCCCC
YAVSFVVTETDAAPPPAPAPVSRTTS
EEEEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA