Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351023

Identifier: 115351023

GI number: 115351023

Start: 1060260

End: 1060670

Strand: Direct

Name: 115351023

Synonym: Bamb_0969

Alternate gene names: NA

Gene position: 1060260-1060670 (Clockwise)

Preceding gene: 115351019

Following gene: 115351030

Centisome position: 29.81

GC content: 70.56

Gene sequence:

>411_bases
ATGTCCAAGATTCGTACGATGCTGATCGGTGCCGCGCTGACGGCGTTCGCAACTTCGGCCGCATTCGCGCAGACGGGCGT
CGCAACGCAGGGTACCGCAGGCGCCGGCGTGCAGACGCAGACCCCTGCAGCAGGGGCCGGCGCCGGCGCGGGCATGCAGG
GTGGTGCCGGCATGAATGCGTCGGGCAGCGCGGTCGGTGGTGCGACCGATGCGGTCGGTGCGGCAGCCGACGGCGCGAAG
GATACGGCGGCGTCGTCGGTCCATTCGACCAAGAAGCACGCGAAGCATGCGACGAAGTCGGCCAAGCACCAGGCCCGCTC
GACGAAGTCGAAGGTCGGCGACGAGGCGGTCGAAGGCGGCGCGTCGACGGGTGTGCAGGGCGGTGCATCGGCCGCGGGCG
GCACGCAGTAA

Upstream 100 bases:

>100_bases
GCGCGCGGGTCTTCTGTCGTACCTGCTGCGTGTTGCGGCAGGGGACGCGACGGAGCGTATCGATGCGCTCCGCGCCCACA
ACTTCTCGAGGAGGATAGTC

Downstream 100 bases:

>100_bases
GCGGCGCCCGCCCGTCACGATGTTCGCGCCGGACGGCGCGTCGTGACGGCGATCGAACGGCGGCCCGGTTCGCTTCGCGC
GAACCGGGCCGTTCTTCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MSKIRTMLIGAALTAFATSAAFAQTGVATQGTAGAGVQTQTPAAGAGAGAGMQGGAGMNASGSAVGGATDAVGAAADGAK
DTAASSVHSTKKHAKHATKSAKHQARSTKSKVGDEAVEGGASTGVQGGASAAGGTQ

Sequences:

>Translated_136_residues
MSKIRTMLIGAALTAFATSAAFAQTGVATQGTAGAGVQTQTPAAGAGAGAGMQGGAGMNASGSAVGGATDAVGAAADGAK
DTAASSVHSTKKHAKHATKSAKHQARSTKSKVGDEAVEGGASTGVQGGASAAGGTQ
>Mature_135_residues
SKIRTMLIGAALTAFATSAAFAQTGVATQGTAGAGVQTQTPAAGAGAGAGMQGGAGMNASGSAVGGATDAVGAAADGAKD
TAASSVHSTKKHAKHATKSAKHQARSTKSKVGDEAVEGGASTGVQGGASAAGGTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12528; Mature: 12397

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIRTMLIGAALTAFATSAAFAQTGVATQGTAGAGVQTQTPAAGAGAGAGMQGGAGMNA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SGSAVGGATDAVGAAADGAKDTAASSVHSTKKHAKHATKSAKHQARSTKSKVGDEAVEGG
CCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ASTGVQGGASAAGGTQ
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKIRTMLIGAALTAFATSAAFAQTGVATQGTAGAGVQTQTPAAGAGAGAGMQGGAGMNA
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SGSAVGGATDAVGAAADGAKDTAASSVHSTKKHAKHATKSAKHQARSTKSKVGDEAVEGG
CCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ASTGVQGGASAAGGTQ
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA