Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350979

Identifier: 115350979

GI number: 115350979

Start: 1017829

End: 1018122

Strand: Direct

Name: 115350979

Synonym: Bamb_0925

Alternate gene names: NA

Gene position: 1017829-1018122 (Clockwise)

Preceding gene: 115350978

Following gene: 115350980

Centisome position: 28.62

GC content: 63.61

Gene sequence:

>294_bases
ATGAAGTTTATCGTCTGGCTGATCCGGGTATTGGTGTTCGTGCTGCTGCTGGTGCTCGCACTGGCCAATACGCAAACCGC
GACGCTGAATTTCCTTGCCGGCTACGCATGGCAAGCGCCGCTGATCCTGATCGGCCTCGCGTTCTTCGTCGTGGGTCTGC
TGGCCGGCCTGCTGTCCGCACTGCCGGCGATCTTCCGTCTGCGCCTCGAGAACGGGCGCCTGAAGCGCGACCTGCGCGCG
GTGCGCGAAACTCCGGTCGTCGTCGATCAGCCGCCGATGCCGCCCGTCATTTAA

Upstream 100 bases:

>100_bases
TGTGCGGTGACGCGGAAACGCTTCCTTTACAATACGGGTCGATTCGGCGTCGCGAAGGGGAGTCGCGCGTCACGGCAAAC
CTCAACAAAGAGAGGGCTAC

Downstream 100 bases:

>100_bases
TACGGACGCCGCGCGAATCTCGCGCGGTTTTCGTCTCTGCTTCGATATTTCGCATGGATCTGGATTTCTGGTGGTTGCTC
GCAATTCCGGTGGCGTTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MKFIVWLIRVLVFVLLLVLALANTQTATLNFLAGYAWQAPLILIGLAFFVVGLLAGLLSALPAIFRLRLENGRLKRDLRA
VRETPVVVDQPPMPPVI

Sequences:

>Translated_97_residues
MKFIVWLIRVLVFVLLLVLALANTQTATLNFLAGYAWQAPLILIGLAFFVVGLLAGLLSALPAIFRLRLENGRLKRDLRA
VRETPVVVDQPPMPPVI
>Mature_97_residues
MKFIVWLIRVLVFVLLLVLALANTQTATLNFLAGYAWQAPLILIGLAFFVVGLLAGLLSALPAIFRLRLENGRLKRDLRA
VRETPVVVDQPPMPPVI

Specific function: Unknown

COG id: COG5416

COG function: function code S; Uncharacterized integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10747; Mature: 10747

Theoretical pI: Translated: 11.82; Mature: 11.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIVWLIRVLVFVLLLVLALANTQTATLNFLAGYAWQAPLILIGLAFFVVGLLAGLLSA
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPAIFRLRLENGRLKRDLRAVRETPVVVDQPPMPPVI
HHHHHHHHHCCCHHHHHHHHHHHCCCEECCCCCCCCC
>Mature Secondary Structure
MKFIVWLIRVLVFVLLLVLALANTQTATLNFLAGYAWQAPLILIGLAFFVVGLLAGLLSA
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPAIFRLRLENGRLKRDLRAVRETPVVVDQPPMPPVI
HHHHHHHHHCCCHHHHHHHHHHHCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA