| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115350979
Identifier: 115350979
GI number: 115350979
Start: 1017829
End: 1018122
Strand: Direct
Name: 115350979
Synonym: Bamb_0925
Alternate gene names: NA
Gene position: 1017829-1018122 (Clockwise)
Preceding gene: 115350978
Following gene: 115350980
Centisome position: 28.62
GC content: 63.61
Gene sequence:
>294_bases ATGAAGTTTATCGTCTGGCTGATCCGGGTATTGGTGTTCGTGCTGCTGCTGGTGCTCGCACTGGCCAATACGCAAACCGC GACGCTGAATTTCCTTGCCGGCTACGCATGGCAAGCGCCGCTGATCCTGATCGGCCTCGCGTTCTTCGTCGTGGGTCTGC TGGCCGGCCTGCTGTCCGCACTGCCGGCGATCTTCCGTCTGCGCCTCGAGAACGGGCGCCTGAAGCGCGACCTGCGCGCG GTGCGCGAAACTCCGGTCGTCGTCGATCAGCCGCCGATGCCGCCCGTCATTTAA
Upstream 100 bases:
>100_bases TGTGCGGTGACGCGGAAACGCTTCCTTTACAATACGGGTCGATTCGGCGTCGCGAAGGGGAGTCGCGCGTCACGGCAAAC CTCAACAAAGAGAGGGCTAC
Downstream 100 bases:
>100_bases TACGGACGCCGCGCGAATCTCGCGCGGTTTTCGTCTCTGCTTCGATATTTCGCATGGATCTGGATTTCTGGTGGTTGCTC GCAATTCCGGTGGCGTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MKFIVWLIRVLVFVLLLVLALANTQTATLNFLAGYAWQAPLILIGLAFFVVGLLAGLLSALPAIFRLRLENGRLKRDLRA VRETPVVVDQPPMPPVI
Sequences:
>Translated_97_residues MKFIVWLIRVLVFVLLLVLALANTQTATLNFLAGYAWQAPLILIGLAFFVVGLLAGLLSALPAIFRLRLENGRLKRDLRA VRETPVVVDQPPMPPVI >Mature_97_residues MKFIVWLIRVLVFVLLLVLALANTQTATLNFLAGYAWQAPLILIGLAFFVVGLLAGLLSALPAIFRLRLENGRLKRDLRA VRETPVVVDQPPMPPVI
Specific function: Unknown
COG id: COG5416
COG function: function code S; Uncharacterized integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10747; Mature: 10747
Theoretical pI: Translated: 11.82; Mature: 11.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFIVWLIRVLVFVLLLVLALANTQTATLNFLAGYAWQAPLILIGLAFFVVGLLAGLLSA CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPAIFRLRLENGRLKRDLRAVRETPVVVDQPPMPPVI HHHHHHHHHCCCHHHHHHHHHHHCCCEECCCCCCCCC >Mature Secondary Structure MKFIVWLIRVLVFVLLLVLALANTQTATLNFLAGYAWQAPLILIGLAFFVVGLLAGLLSA CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPAIFRLRLENGRLKRDLRAVRETPVVVDQPPMPPVI HHHHHHHHHCCCHHHHHHHHHHHCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA