| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115350963
Identifier: 115350963
GI number: 115350963
Start: 999675
End: 999872
Strand: Direct
Name: 115350963
Synonym: Bamb_0909
Alternate gene names: NA
Gene position: 999675-999872 (Clockwise)
Preceding gene: 115350962
Following gene: 115350970
Centisome position: 28.11
GC content: 64.14
Gene sequence:
>198_bases GTGGCCACGCTGCCGCTCGCCGGCATCTCCCGATGGAATCAGATTGCCCCGTTCGTTGGGGTATCACGGGAGACATGGAG GAAGCGCTACCTCGAGGGCCGCGCGCCGCAGCCGATTCAGCTGACCCAACGCTGCACCGTCTGGCGGAATGAGGAGGTGC ATCGCTGGTTGGCGGATCCAGTCAGCTATCAAGCCTGA
Upstream 100 bases:
>100_bases TCGACATGGCTTGGCCACGGTGACGGACGTGGAACATGGGTAAAGCGAGTCTACGGGCGTGCGGCATTGGTCGAAGCGGA GGCGCGCCATGCATAAGCAT
Downstream 100 bases:
>100_bases ACGCGCGAACCAGACCTCCTCAATGCCAGCGAGCCGACCAATGTTGCCGCAGAGCGGTATCGATCTAGGCGAGCATGCGA TACGTTTTGACGACCGGCGG
Product: phage transcriptional regulator AlpA
Products: NA
Alternate protein names: Prophage CP4-57 Regulatory Protein; Conserved Domain Protein; Prophage CP4-57 Regulatory
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MATLPLAGISRWNQIAPFVGVSRETWRKRYLEGRAPQPIQLTQRCTVWRNEEVHRWLADPVSYQA
Sequences:
>Translated_65_residues MATLPLAGISRWNQIAPFVGVSRETWRKRYLEGRAPQPIQLTQRCTVWRNEEVHRWLADPVSYQA >Mature_64_residues ATLPLAGISRWNQIAPFVGVSRETWRKRYLEGRAPQPIQLTQRCTVWRNEEVHRWLADPVSYQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7636; Mature: 7505
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLPLAGISRWNQIAPFVGVSRETWRKRYLEGRAPQPIQLTQRCTVWRNEEVHRWLADP CCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCC VSYQA CCCCC >Mature Secondary Structure ATLPLAGISRWNQIAPFVGVSRETWRKRYLEGRAPQPIQLTQRCTVWRNEEVHRWLADP CCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCC VSYQA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA