Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350954

Identifier: 115350954

GI number: 115350954

Start: 991060

End: 991413

Strand: Direct

Name: 115350954

Synonym: Bamb_0900

Alternate gene names: NA

Gene position: 991060-991413 (Clockwise)

Preceding gene: 115350953

Following gene: 115350957

Centisome position: 27.87

GC content: 67.8

Gene sequence:

>354_bases
ATGAAGTCGCTCGTTCAAGCCGTTGTCGTTGCTGCCGCTCTCGTCGCCCCGGTCGTGTCGTTCGCGCAGCCCGGCTCGGC
ACTCACCCGCGCACAGGTTCGCGCCGAACTCGTTCAGCTCCAGCAGGCCGGTTACAACACCGCCCGCGGCGAAGATCCGC
ACTATCCGGAAGCCATCCAGGCAGCCACTGCGCGCGTCGCCGAGCAGCAACGCAGCGCGCTTGCCCAGGCGCAAGGCGCC
GATGCCAGCGGCTATGGCGCACAAGCGCAAGGCGCATCGGCATCGGGCTCGCGTGCGATCGGCGTGCGCCCGGCCAGTGC
CGAAGAAATGAAGTCGCTGTATCGCGGCAGCTAA

Upstream 100 bases:

>100_bases
AACCTGCCTTATTCTTAAGCACGCGCCTACATAAACTTCGATCTGTCAGCGATGAACGGGTGTTCACCGCGAAATCAGAC
AAATCTGGAGGTAGGTCATC

Downstream 100 bases:

>100_bases
GCGGCGCATCACCGGATGACGCTGCGCGGGCGGCGCAACGACGACACGTTGCGCCCCGTCGCGATGCCCGGCGGTACCGA
ACATCCGTTACCTCCGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MKSLVQAVVVAAALVAPVVSFAQPGSALTRAQVRAELVQLQQAGYNTARGEDPHYPEAIQAATARVAEQQRSALAQAQGA
DASGYGAQAQGASASGSRAIGVRPASAEEMKSLYRGS

Sequences:

>Translated_117_residues
MKSLVQAVVVAAALVAPVVSFAQPGSALTRAQVRAELVQLQQAGYNTARGEDPHYPEAIQAATARVAEQQRSALAQAQGA
DASGYGAQAQGASASGSRAIGVRPASAEEMKSLYRGS
>Mature_117_residues
MKSLVQAVVVAAALVAPVVSFAQPGSALTRAQVRAELVQLQQAGYNTARGEDPHYPEAIQAATARVAEQQRSALAQAQGA
DASGYGAQAQGASASGSRAIGVRPASAEEMKSLYRGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11924; Mature: 11924

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLVQAVVVAAALVAPVVSFAQPGSALTRAQVRAELVQLQQAGYNTARGEDPHYPEAIQ
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
AATARVAEQQRSALAQAQGADASGYGAQAQGASASGSRAIGVRPASAEEMKSLYRGS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MKSLVQAVVVAAALVAPVVSFAQPGSALTRAQVRAELVQLQQAGYNTARGEDPHYPEAIQ
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
AATARVAEQQRSALAQAQGADASGYGAQAQGASASGSRAIGVRPASAEEMKSLYRGS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA