| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is minC [H]
Identifier: 115350897
GI number: 115350897
Start: 930967
End: 931731
Strand: Direct
Name: minC [H]
Synonym: Bamb_0843
Alternate gene names: 115350897
Gene position: 930967-931731 (Clockwise)
Preceding gene: 115350896
Following gene: 115350898
Centisome position: 26.18
GC content: 64.97
Gene sequence:
>765_bases ATGTCGCTTAAAAAATCGCCATTCTTCGAGCTGCGCAGCGGATCGGTCGATACGTTGCTGTTCACCGTGAAGACGACCGA TCTCGATGCGTTGCGTACCGAACTGGTCAAGCGCTTCGAAGCGACTCCCGAGTTTTTTGCCGATGACGTCGTCGCGATCG ACGTCCGCCGCCTCGCGGACGGCGAACGCGTCGCGCTCGCCGACATCCGCCAGATGCTGAACGACGTGCGGATGCGCCCG GTGGGCGTCGTGGCGCTGGCCACGCAGGGCTGGGCGGGGGAAGCCGGTCTGCCGTTGCTGGAGGCACGTGATCGCCGCGT GTCGGCCGCGAAGCCGGCCGACGAAGCGGAGCCAGCGCCTGTCGTTGCCGAGGCCGTTGCGGCAGCCGAACCGGCGCCGG AGCCTGCACCGACGCAGATTTCGGCGAGCGGCCAGACGCTGGTGATCGATCGGCCGCTGCGTTCGGGGCAGCAGATTTAC GCGAAAGGGGACCTCGTGGTGCTTGCGCCGGTCAGTCACGGCGCCGAGATCATCGCGGAAGGCAACATCCACATCTACGC GCCGTTGCGCGGCCGCGCACTCGCGGGCGTGCACGGCAATCACGACGCGCGCATTTTCTGCACGTGTCTCGAACCGGAAC TGATTTCAATCGCGGGTATCTATCGAACGACCGAGAACCCGTTGCCCGCCGACATACTGGGCAAAGCGGTGCAGATCCGG CTCGAAGAGGAAAAACTGATGATCGAACCGCTGCGCCTGACGTGA
Upstream 100 bases:
>100_bases CCCCTTCTGGTCGCGCGTTCGCCGCGACCCGGTTTCCCAAAAATGATGGCTGCACGCGTGGACGCCTGTAAAATACGCAA AAATTTTTTGCAGAGTGTCC
Downstream 100 bases:
>100_bases TTCACGCGGCGCACGCCGGATCGATCGGCTCTCATTGACGAACACAGGGTATTGGGTAAATGGCAAAAATCATCGTGGTG ACTTCGGGCAAGGGCGGCGT
Product: septum formation inhibitor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MSLKKSPFFELRSGSVDTLLFTVKTTDLDALRTELVKRFEATPEFFADDVVAIDVRRLADGERVALADIRQMLNDVRMRP VGVVALATQGWAGEAGLPLLEARDRRVSAAKPADEAEPAPVVAEAVAAAEPAPEPAPTQISASGQTLVIDRPLRSGQQIY AKGDLVVLAPVSHGAEIIAEGNIHIYAPLRGRALAGVHGNHDARIFCTCLEPELISIAGIYRTTENPLPADILGKAVQIR LEEEKLMIEPLRLT
Sequences:
>Translated_254_residues MSLKKSPFFELRSGSVDTLLFTVKTTDLDALRTELVKRFEATPEFFADDVVAIDVRRLADGERVALADIRQMLNDVRMRP VGVVALATQGWAGEAGLPLLEARDRRVSAAKPADEAEPAPVVAEAVAAAEPAPEPAPTQISASGQTLVIDRPLRSGQQIY AKGDLVVLAPVSHGAEIIAEGNIHIYAPLRGRALAGVHGNHDARIFCTCLEPELISIAGIYRTTENPLPADILGKAVQIR LEEEKLMIEPLRLT >Mature_253_residues SLKKSPFFELRSGSVDTLLFTVKTTDLDALRTELVKRFEATPEFFADDVVAIDVRRLADGERVALADIRQMLNDVRMRPV GVVALATQGWAGEAGLPLLEARDRRVSAAKPADEAEPAPVVAEAVAAAEPAPEPAPTQISASGQTLVIDRPLRSGQQIYA KGDLVVLAPVSHGAEIIAEGNIHIYAPLRGRALAGVHGNHDARIFCTCLEPELISIAGIYRTTENPLPADILGKAVQIRL EEEKLMIEPLRLT
Specific function: Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize ftsZ filaments that have formed before they mature into polar Z rings. Prevents ftsZ polymerization [H]
COG id: COG0850
COG function: function code D; Septum formation inhibitor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the minC family [H]
Homologues:
Organism=Escherichia coli, GI1787424, Length=250, Percent_Identity=34, Blast_Score=117, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016098 - InterPro: IPR013033 - InterPro: IPR007874 - InterPro: IPR005526 [H]
Pfam domain/function: PF03775 MinC_C; PF05209 MinC_N [H]
EC number: NA
Molecular weight: Translated: 27410; Mature: 27279
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKKSPFFELRSGSVDTLLFTVKTTDLDALRTELVKRFEATPEFFADDVVAIDVRRLAD CCCCCCCCEEECCCCEEEEEEEEECCCHHHHHHHHHHHHCCCHHHHCCCEEEEEEEHHCC GERVALADIRQMLNDVRMRPVGVVALATQGWAGEAGLPLLEARDRRVSAAKPADEAEPAP CCEEEHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC VVAEAVAAAEPAPEPAPTQISASGQTLVIDRPLRSGQQIYAKGDLVVLAPVSHGAEIIAE HHHHHHHHCCCCCCCCCCEEECCCCEEEEECCCCCCCEEEECCCEEEEEECCCCCEEEEE GNIHIYAPLRGRALAGVHGNHDARIFCTCLEPELISIAGIYRTTENPLPADILGKAVQIR CCEEEEECCCCCEEECCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCHHHCCCEEEEE LEEEKLMIEPLRLT ECCCEEEEEEECCC >Mature Secondary Structure SLKKSPFFELRSGSVDTLLFTVKTTDLDALRTELVKRFEATPEFFADDVVAIDVRRLAD CCCCCCCEEECCCCEEEEEEEEECCCHHHHHHHHHHHHCCCHHHHCCCEEEEEEEHHCC GERVALADIRQMLNDVRMRPVGVVALATQGWAGEAGLPLLEARDRRVSAAKPADEAEPAP CCEEEHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC VVAEAVAAAEPAPEPAPTQISASGQTLVIDRPLRSGQQIYAKGDLVVLAPVSHGAEIIAE HHHHHHHHCCCCCCCCCCEEECCCCEEEEECCCCCCCEEEECCCEEEEEECCCCCEEEEE GNIHIYAPLRGRALAGVHGNHDARIFCTCLEPELISIAGIYRTTENPLPADILGKAVQIR CCEEEEECCCCCEEECCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCHHHCCCEEEEE LEEEKLMIEPLRLT ECCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA