| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115350896
Identifier: 115350896
GI number: 115350896
Start: 930295
End: 930810
Strand: Direct
Name: 115350896
Synonym: Bamb_0842
Alternate gene names: NA
Gene position: 930295-930810 (Clockwise)
Preceding gene: 115350894
Following gene: 115350897
Centisome position: 26.16
GC content: 66.67
Gene sequence:
>516_bases ATGAGTTCGACCTTGACCGTTCGTCGTATCGCTGCCGACCAGGGCCGCGTGTATCGCGAACTCCGCGCCGCGTCATTGCG TGAGCCCTACGCGCCCGGCGAAGCGCCGGAGGCCGAATTGCTTAACGTCGATGCCGACGCGGCGGCGGCCATCGCCGCGC TGCGCGCCACGTCCGACGAGTCGACGACTTTCCTGCTGTACACCGAAGGCCATCCGGCCGGCATGATCGGCGCGTATTTC GACAATACGCCCGAGCGGCGCGCGTTCGTCAGCGAGCTGTGGGTCGCGCACGCGGTCCGTCATCTGCGCGGCGGCGTGCT GCTGCTGGAAACGGCCACCGCGTGGCTGGCCGAACGCGGTGCGCAGGACGTCTATGCATGGATCGCCGACGCAAACCGCA ACGCCATCCGTTTCTACGAACGCGCGGGTTTCGGCAACACGGGCGAGCATGCACCAATCGCGCGCATGCCCGGCGCGATG AAGTCGTTGTTCGTGTCGCACTTCAACACACCCTGA
Upstream 100 bases:
>100_bases TGCCTTTCGATCCGCGCTGTCATTTGAAAATAACGATTTGACTCATGCCCCGCTTTCGGTTGAAGCTAGTAGCTTGCTGT CCGAAGGGGGCTGTGCCTGC
Downstream 100 bases:
>100_bases CGCATGAACGCGCGGGCCGCACGGCGCAATGAAGGCCCCGTCGCCCGTCCCACTGCCCCCTTCTGGTCGCGCGTTCGCCG CGACCCGGTTTCCCAAAAAT
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase GNAT Family; Acetyltransferase GNAT Family Protein; Acetyltransferase
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSSTLTVRRIAADQGRVYRELRAASLREPYAPGEAPEAELLNVDADAAAAIAALRATSDESTTFLLYTEGHPAGMIGAYF DNTPERRAFVSELWVAHAVRHLRGGVLLLETATAWLAERGAQDVYAWIADANRNAIRFYERAGFGNTGEHAPIARMPGAM KSLFVSHFNTP
Sequences:
>Translated_171_residues MSSTLTVRRIAADQGRVYRELRAASLREPYAPGEAPEAELLNVDADAAAAIAALRATSDESTTFLLYTEGHPAGMIGAYF DNTPERRAFVSELWVAHAVRHLRGGVLLLETATAWLAERGAQDVYAWIADANRNAIRFYERAGFGNTGEHAPIARMPGAM KSLFVSHFNTP >Mature_170_residues SSTLTVRRIAADQGRVYRELRAASLREPYAPGEAPEAELLNVDADAAAAIAALRATSDESTTFLLYTEGHPAGMIGAYFD NTPERRAFVSELWVAHAVRHLRGGVLLLETATAWLAERGAQDVYAWIADANRNAIRFYERAGFGNTGEHAPIARMPGAMK SLFVSHFNTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18662; Mature: 18531
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTLTVRRIAADQGRVYRELRAASLREPYAPGEAPEAELLNVDADAAAAIAALRATSDE CCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCC STTFLLYTEGHPAGMIGAYFDNTPERRAFVSELWVAHAVRHLRGGVLLLETATAWLAERG CEEEEEEECCCCCCEEEHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHCC AQDVYAWIADANRNAIRFYERAGFGNTGEHAPIARMPGAMKSLFVSHFNTP CHHHHHHHHCCCCCCEEHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHCCCC >Mature Secondary Structure SSTLTVRRIAADQGRVYRELRAASLREPYAPGEAPEAELLNVDADAAAAIAALRATSDE CCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCC STTFLLYTEGHPAGMIGAYFDNTPERRAFVSELWVAHAVRHLRGGVLLLETATAWLAERG CEEEEEEECCCCCCEEEHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHCC AQDVYAWIADANRNAIRFYERAGFGNTGEHAPIARMPGAMKSLFVSHFNTP CHHHHHHHHCCCCCCEEHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA