| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is crcB [H]
Identifier: 115350859
GI number: 115350859
Start: 891182
End: 891595
Strand: Direct
Name: crcB [H]
Synonym: Bamb_0805
Alternate gene names: 115350859
Gene position: 891182-891595 (Clockwise)
Preceding gene: 115350857
Following gene: 115350860
Centisome position: 25.06
GC content: 66.18
Gene sequence:
>414_bases ATGCGGCCCCGTCAGCGAGGAGCTCCCTTGTTCTATTCGATCGTCGCGATCTTCGTCGGCGCCGGGTTCGGCGCAGTGCT GCGCTGGTTCCTGGCCCTTGCGCTCAACGAATTCTTTCCCGCCGTGCCGCTCGGCACGCTTGCCGCGAACCTGATCGGCG GCTACGTGATCGGCGTGGCCGTCGTCGTATTTACCGCACGCGTCGGGCTGCCGCCCGAGTGGCGGCTGTTCGTGATCACG GGCTTTCTCGGCGGTCTCACGACGTTCTCGACCTATTCGGTCGAAGTGATGACGCACGCGGTGCAGGGCGAATTCGGATG GGCGATCGCGGTGGCTGCCCTACACTTGACTGGATCGTTCACGCTGACGGCGCTCGGCATGTGGACCGCGCGCGCGTGGT TCGCGGCGGCCTGA
Upstream 100 bases:
>100_bases CGCGGATACGGTGCGGCCCGACTCCGCGCATGCCGACCGGCCGGCGGCATTGCCGCCGCGGCGCGATTCCGCATACAGTT CGGCGTGGGCCGCGTCCGCC
Downstream 100 bases:
>100_bases GCGCGCCGGCACCGGGAGGGTGCGATGGACAGGGTCTTCTTGCGCTTTTATGTGCACGAGCAGCACCGGCTGCACTGGAA GCCGCTATGGGAGTGGTTGC
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MRPRQRGAPLFYSIVAIFVGAGFGAVLRWFLALALNEFFPAVPLGTLAANLIGGYVIGVAVVVFTARVGLPPEWRLFVIT GFLGGLTTFSTYSVEVMTHAVQGEFGWAIAVAALHLTGSFTLTALGMWTARAWFAAA
Sequences:
>Translated_137_residues MRPRQRGAPLFYSIVAIFVGAGFGAVLRWFLALALNEFFPAVPLGTLAANLIGGYVIGVAVVVFTARVGLPPEWRLFVIT GFLGGLTTFSTYSVEVMTHAVQGEFGWAIAVAALHLTGSFTLTALGMWTARAWFAAA >Mature_137_residues MRPRQRGAPLFYSIVAIFVGAGFGAVLRWFLALALNEFFPAVPLGTLAANLIGGYVIGVAVVVFTARVGLPPEWRLFVIT GFLGGLTTFSTYSVEVMTHAVQGEFGWAIAVAALHLTGSFTLTALGMWTARAWFAAA
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
Organism=Escherichia coli, GI1786842, Length=115, Percent_Identity=46.0869565217391, Blast_Score=109, Evalue=7e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 14610; Mature: 14610
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPRQRGAPLFYSIVAIFVGAGFGAVLRWFLALALNEFFPAVPLGTLAANLIGGYVIGVA CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VVVFTARVGLPPEWRLFVITGFLGGLTTFSTYSVEVMTHAVQGEFGWAIAVAALHLTGSF HHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCH TLTALGMWTARAWFAAA HHHHHHHHHHHHHHHCC >Mature Secondary Structure MRPRQRGAPLFYSIVAIFVGAGFGAVLRWFLALALNEFFPAVPLGTLAANLIGGYVIGVA CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VVVFTARVGLPPEWRLFVITGFLGGLTTFSTYSVEVMTHAVQGEFGWAIAVAALHLTGSF HHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCH TLTALGMWTARAWFAAA HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA