| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115350810
Identifier: 115350810
GI number: 115350810
Start: 838208
End: 838456
Strand: Direct
Name: 115350810
Synonym: Bamb_0756
Alternate gene names: NA
Gene position: 838208-838456 (Clockwise)
Preceding gene: 115350809
Following gene: 115350811
Centisome position: 23.57
GC content: 60.24
Gene sequence:
>249_bases ATGATCAGCTCGCGGGGCGGGCGTGCCCGGTGGTGTGATGCCGACAACGGCTCCGCATACAGCATCCACCTGTATGCAGG CATGTTGCCGCGGACGAAGCGCATCAAAATTGCCGGCCGCGCCCGAAGCGCGTTTTTCGACAACGTCGATCTGATCAAGA AGCTGAGATTCACCCGGCCCCGCTTGCCGGTGATGGATAATTTCGTCAGTGTGGCCTGGCTGCAGACGATGGTGAGGAGT TTGCCGTAG
Upstream 100 bases:
>100_bases TCGCTTCCAGGACGTGTACGGACGGGCTTGAGCCGGGAATGATGACAGCCCGGTGCGTTGCCGGGCTTCATGGCGCGGCT GGGGGTGTTTTTGACCGACG
Downstream 100 bases:
>100_bases TGGATAGCTTTTATCGCGCGTTTGAAGATCAGCATCGAGGCTCAAGGGAACTGATCAAAAGTCGGCTGGCGAAATACCAG CCGTTCATTGCGCCCCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MISSRGGRARWCDADNGSAYSIHLYAGMLPRTKRIKIAGRARSAFFDNVDLIKKLRFTRPRLPVMDNFVSVAWLQTMVRS LP
Sequences:
>Translated_82_residues MISSRGGRARWCDADNGSAYSIHLYAGMLPRTKRIKIAGRARSAFFDNVDLIKKLRFTRPRLPVMDNFVSVAWLQTMVRS LP >Mature_82_residues MISSRGGRARWCDADNGSAYSIHLYAGMLPRTKRIKIAGRARSAFFDNVDLIKKLRFTRPRLPVMDNFVSVAWLQTMVRS LP
Specific function: Unknown
COG id: COG1682
COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9356; Mature: 9356
Theoretical pI: Translated: 11.92; Mature: 11.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISSRGGRARWCDADNGSAYSIHLYAGMLPRTKRIKIAGRARSAFFDNVDLIKKLRFTRP CCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCEEEEECCCCHHHHCCHHHHHHHHCCCC RLPVMDNFVSVAWLQTMVRSLP CCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MISSRGGRARWCDADNGSAYSIHLYAGMLPRTKRIKIAGRARSAFFDNVDLIKKLRFTRP CCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCEEEEECCCCHHHHCCHHHHHHHHCCCC RLPVMDNFVSVAWLQTMVRSLP CCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA