Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350800

Identifier: 115350800

GI number: 115350800

Start: 825948

End: 826220

Strand: Direct

Name: 115350800

Synonym: Bamb_0746

Alternate gene names: NA

Gene position: 825948-826220 (Clockwise)

Preceding gene: 115350799

Following gene: 115350801

Centisome position: 23.22

GC content: 54.58

Gene sequence:

>273_bases
TTGCGGCGAAGACGTAGATTCTTTACATATTTTGACGAAGACAAGATAGATGCGTCTGGCGTTCGTCACGACCCGTATTT
CGAATGTGCGTGGGACTCGCGTCTCTTCCATTCGCAGAGCATGTTTTGCCGCCTGGGCGCGCTCCACAAACGGTTCGCGG
AGAAGGGGCGGATTTCATGTCGGCTTCGAAGGTTCGCTGGTTTGCGACTTTGCATTGCGCGGCATCGAGCAACTCGATGC
CGCCGGCATCCATCAACAGTCTTTGGAGCTTGA

Upstream 100 bases:

>100_bases
GCGTGGCTCTATTCATCCGGTCCAGTTCATCCATTCGATGTACGTACTCCGCAGGATGGCAGTGCGGGATGATGTTGTCG
CGTGATCATGGTCCACGCGA

Downstream 100 bases:

>100_bases
CGGCTTCCGCCTTCCTCGCCCCGCCGCCGCGCGTCGAGCCATTGTGTTGAGGAATCCACGACGCCTCGCCCTTGCGGTCG
TCTCCTTGGGGCAGTCGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MRRRRRFFTYFDEDKIDASGVRHDPYFECAWDSRLFHSQSMFCRLGALHKRFAEKGRISCRLRRFAGLRLCIARHRATRC
RRHPSTVFGA

Sequences:

>Translated_90_residues
MRRRRRFFTYFDEDKIDASGVRHDPYFECAWDSRLFHSQSMFCRLGALHKRFAEKGRISCRLRRFAGLRLCIARHRATRC
RRHPSTVFGA
>Mature_90_residues
MRRRRRFFTYFDEDKIDASGVRHDPYFECAWDSRLFHSQSMFCRLGALHKRFAEKGRISCRLRRFAGLRLCIARHRATRC
RRHPSTVFGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10853; Mature: 10853

Theoretical pI: Translated: 11.82; Mature: 11.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRRRFFTYFDEDKIDASGVRHDPYFECAWDSRLFHSQSMFCRLGALHKRFAEKGRISC
CCCCCCCCEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
RLRRFAGLRLCIARHRATRCRRHPSTVFGA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRRRRRFFTYFDEDKIDASGVRHDPYFECAWDSRLFHSQSMFCRLGALHKRFAEKGRISC
CCCCCCCCEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
RLRRFAGLRLCIARHRATRCRRHPSTVFGA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA