Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is pyrR [H]

Identifier: 115350793

GI number: 115350793

Start: 818571

End: 819086

Strand: Direct

Name: pyrR [H]

Synonym: Bamb_0739

Alternate gene names: 115350793

Gene position: 818571-819086 (Clockwise)

Preceding gene: 115350792

Following gene: 115350794

Centisome position: 23.02

GC content: 74.03

Gene sequence:

>516_bases
ATGAGCACCATTGACGCCGACGCGCTCTACCGCGTCCTGCTCGAGCAGATTCGCGACGCATACGGCACGGCCTTCGCCGA
GCCGGGCGGCCCGCGGCTCGCCGGCATCTACAGCGGCGGCGTGTGGCTCGCCGAGCGCCTCGCGCGCGATCTCGGCGCGC
CGGCGTTCGGCGTCGTGAACGTCGCGCTGCATCGCGACGACTACGCGAAGAAGGGGCTGCACAGCCAGGCCAGCCCGACG
TCGCTGCCGTTCGAGGTCGGCGGCGCGCGCATCGTGCTCGTCGACGACGTGCTGTACACCGGCCGCACCGTGCGCGCCGC
GCTCAACGAACTGTTCGACTACGGCCGTCCGGCCGCGGTCGAGCTCGCGGTGCTCGCCGATCGCGGCGGCCGTGAGCTGC
CGGTCGCCGCGCGCTTCGCGGGCGGCACGCTCGACGTGCCGGCCGACGCGACGCTCGTGCTCGCGCGCGACGAAGCCGCC
CAGCTCACGCTGCGCATCGAACCGCACGGCGCCTGA

Upstream 100 bases:

>100_bases
CTGCGCGAGCGCAACGTGCGCGGGCGCGCCCGCGCCGAGATGCTCGATGCCGAGGCCGCGCGCGTGATCCTTCAACAGTA
TCTCGATCAATTGTCCGACC

Downstream 100 bases:

>100_bases
GCGAACCGCGAAACCGTATCCCGGGCCGCCGGTTCGCGCCGCGGCCCGTTTGCATAGTTGGAATCACGCACACCATGACC
ACCGACACCACTGGCCGCAC

Product: bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase

Products: NA

Alternate protein names: Pyrimidine operon regulatory protein; Uracil phosphoribosyltransferase; UPRTase [H]

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MSTIDADALYRVLLEQIRDAYGTAFAEPGGPRLAGIYSGGVWLAERLARDLGAPAFGVVNVALHRDDYAKKGLHSQASPT
SLPFEVGGARIVLVDDVLYTGRTVRAALNELFDYGRPAAVELAVLADRGGRELPVAARFAGGTLDVPADATLVLARDEAA
QLTLRIEPHGA

Sequences:

>Translated_171_residues
MSTIDADALYRVLLEQIRDAYGTAFAEPGGPRLAGIYSGGVWLAERLARDLGAPAFGVVNVALHRDDYAKKGLHSQASPT
SLPFEVGGARIVLVDDVLYTGRTVRAALNELFDYGRPAAVELAVLADRGGRELPVAARFAGGTLDVPADATLVLARDEAA
QLTLRIEPHGA
>Mature_170_residues
STIDADALYRVLLEQIRDAYGTAFAEPGGPRLAGIYSGGVWLAERLARDLGAPAFGVVNVALHRDDYAKKGLHSQASPTS
LPFEVGGARIVLVDDVLYTGRTVRAALNELFDYGRPAAVELAVLADRGGRELPVAARFAGGTLDVPADATLVLARDEAAQ
LTLRIEPHGA

Specific function: Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant [H]

COG id: COG2065

COG function: function code F; Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000836
- InterPro:   IPR023050 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: =2.4.2.9 [H]

Molecular weight: Translated: 18081; Mature: 17950

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIDADALYRVLLEQIRDAYGTAFAEPGGPRLAGIYSGGVWLAERLARDLGAPAFGVVN
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCHHEEE
VALHRDDYAKKGLHSQASPTSLPFEVGGARIVLVDDVLYTGRTVRAALNELFDYGRPAAV
EEEECCHHHHHCCCCCCCCCCCCEECCCEEEEEECCCHHCCHHHHHHHHHHHHCCCCCCE
ELAVLADRGGRELPVAARFAGGTLDVPADATLVLARDEAAQLTLRIEPHGA
EEEEEECCCCCCCCEEEEECCCEEECCCCCEEEEEECCCEEEEEEEECCCC
>Mature Secondary Structure 
STIDADALYRVLLEQIRDAYGTAFAEPGGPRLAGIYSGGVWLAERLARDLGAPAFGVVN
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCHHEEE
VALHRDDYAKKGLHSQASPTSLPFEVGGARIVLVDDVLYTGRTVRAALNELFDYGRPAAV
EEEECCHHHHHCCCCCCCCCCCCEECCCEEEEEECCCHHCCHHHHHHHHHHHHCCCCCCE
ELAVLADRGGRELPVAARFAGGTLDVPADATLVLARDEAAQLTLRIEPHGA
EEEEEECCCCCCCCEEEEECCCEEECCCCCEEEEEECCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]