| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is pyrR [H]
Identifier: 115350793
GI number: 115350793
Start: 818571
End: 819086
Strand: Direct
Name: pyrR [H]
Synonym: Bamb_0739
Alternate gene names: 115350793
Gene position: 818571-819086 (Clockwise)
Preceding gene: 115350792
Following gene: 115350794
Centisome position: 23.02
GC content: 74.03
Gene sequence:
>516_bases ATGAGCACCATTGACGCCGACGCGCTCTACCGCGTCCTGCTCGAGCAGATTCGCGACGCATACGGCACGGCCTTCGCCGA GCCGGGCGGCCCGCGGCTCGCCGGCATCTACAGCGGCGGCGTGTGGCTCGCCGAGCGCCTCGCGCGCGATCTCGGCGCGC CGGCGTTCGGCGTCGTGAACGTCGCGCTGCATCGCGACGACTACGCGAAGAAGGGGCTGCACAGCCAGGCCAGCCCGACG TCGCTGCCGTTCGAGGTCGGCGGCGCGCGCATCGTGCTCGTCGACGACGTGCTGTACACCGGCCGCACCGTGCGCGCCGC GCTCAACGAACTGTTCGACTACGGCCGTCCGGCCGCGGTCGAGCTCGCGGTGCTCGCCGATCGCGGCGGCCGTGAGCTGC CGGTCGCCGCGCGCTTCGCGGGCGGCACGCTCGACGTGCCGGCCGACGCGACGCTCGTGCTCGCGCGCGACGAAGCCGCC CAGCTCACGCTGCGCATCGAACCGCACGGCGCCTGA
Upstream 100 bases:
>100_bases CTGCGCGAGCGCAACGTGCGCGGGCGCGCCCGCGCCGAGATGCTCGATGCCGAGGCCGCGCGCGTGATCCTTCAACAGTA TCTCGATCAATTGTCCGACC
Downstream 100 bases:
>100_bases GCGAACCGCGAAACCGTATCCCGGGCCGCCGGTTCGCGCCGCGGCCCGTTTGCATAGTTGGAATCACGCACACCATGACC ACCGACACCACTGGCCGCAC
Product: bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase
Products: NA
Alternate protein names: Pyrimidine operon regulatory protein; Uracil phosphoribosyltransferase; UPRTase [H]
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSTIDADALYRVLLEQIRDAYGTAFAEPGGPRLAGIYSGGVWLAERLARDLGAPAFGVVNVALHRDDYAKKGLHSQASPT SLPFEVGGARIVLVDDVLYTGRTVRAALNELFDYGRPAAVELAVLADRGGRELPVAARFAGGTLDVPADATLVLARDEAA QLTLRIEPHGA
Sequences:
>Translated_171_residues MSTIDADALYRVLLEQIRDAYGTAFAEPGGPRLAGIYSGGVWLAERLARDLGAPAFGVVNVALHRDDYAKKGLHSQASPT SLPFEVGGARIVLVDDVLYTGRTVRAALNELFDYGRPAAVELAVLADRGGRELPVAARFAGGTLDVPADATLVLARDEAA QLTLRIEPHGA >Mature_170_residues STIDADALYRVLLEQIRDAYGTAFAEPGGPRLAGIYSGGVWLAERLARDLGAPAFGVVNVALHRDDYAKKGLHSQASPTS LPFEVGGARIVLVDDVLYTGRTVRAALNELFDYGRPAAVELAVLADRGGRELPVAARFAGGTLDVPADATLVLARDEAAQ LTLRIEPHGA
Specific function: Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant [H]
COG id: COG2065
COG function: function code F; Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 - InterPro: IPR023050 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.9 [H]
Molecular weight: Translated: 18081; Mature: 17950
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIDADALYRVLLEQIRDAYGTAFAEPGGPRLAGIYSGGVWLAERLARDLGAPAFGVVN CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCHHEEE VALHRDDYAKKGLHSQASPTSLPFEVGGARIVLVDDVLYTGRTVRAALNELFDYGRPAAV EEEECCHHHHHCCCCCCCCCCCCEECCCEEEEEECCCHHCCHHHHHHHHHHHHCCCCCCE ELAVLADRGGRELPVAARFAGGTLDVPADATLVLARDEAAQLTLRIEPHGA EEEEEECCCCCCCCEEEEECCCEEECCCCCEEEEEECCCEEEEEEEECCCC >Mature Secondary Structure STIDADALYRVLLEQIRDAYGTAFAEPGGPRLAGIYSGGVWLAERLARDLGAPAFGVVN CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCHHEEE VALHRDDYAKKGLHSQASPTSLPFEVGGARIVLVDDVLYTGRTVRAALNELFDYGRPAAV EEEECCHHHHHCCCCCCCCCCCCEECCCEEEEEECCCHHCCHHHHHHHHHHHHCCCCCCE ELAVLADRGGRELPVAARFAGGTLDVPADATLVLARDEAAQLTLRIEPHGA EEEEEECCCCCCCCEEEEECCCEEECCCCCEEEEEECCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]