Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350780

Identifier: 115350780

GI number: 115350780

Start: 808717

End: 809142

Strand: Direct

Name: 115350780

Synonym: Bamb_0726

Alternate gene names: NA

Gene position: 808717-809142 (Clockwise)

Preceding gene: 115350779

Following gene: 115350781

Centisome position: 22.74

GC content: 67.84

Gene sequence:

>426_bases
ATGACGAAGTTTTTCGACGCCCGTCCGGCGGTGCCGTGCCGTAATGCCATGCCAAGGAGAACGGGAATGAAGACGATGCT
GTTCGCCGTCGCGCTGACGGCCGCGATCGCGCGGCCCGCGGCCGCCGAGCCGCCGCAGGCCGGCAACGGGAAACTGGTCG
ACGAAGATCACATGACGCTGTACGTGTTCGATCACGACGCGCCGGGCAAGAGCACCTGCACCGGCACCTGCGCGGCCAAC
TGGCCGCCGGCGCTCGCCGACGCATACGACAAGGCGTCGGGTGCGCTGAGCCTCGTCACGCGCGACGACGGCAAGAAGCA
ATGGGCGTACAACGGTCGCCCGCTGTATCGCTGGAAAATGGACCACAAGGCCGGTGACGCGGGCGGCGACGGGATCGGCG
GCATGTGGCACGTCGCACGTCCCTGA

Upstream 100 bases:

>100_bases
GGACGAATGGCGGGCGATCGGCGCGCTGCATGGAATAACCGCCCGCGGCCGTCCGTTTATATACCGAGTCGCGGCGCAAT
CGGGCAGCGGGATAATGAAC

Downstream 100 bases:

>100_bases
AAAACGGACTGACTGACGGCGCGGCGACGCGCGAGGCATCCGGATGAGCTACGAATCGGACCTGCTGGTGTGGCTGCCGC
ATCTCACGCGCTATGCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Secreted Repeat-Containing Protein; Signal Peptide Protein; Secreted Repeat Protein; Secreted Protein; Exported Protein

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MTKFFDARPAVPCRNAMPRRTGMKTMLFAVALTAAIARPAAAEPPQAGNGKLVDEDHMTLYVFDHDAPGKSTCTGTCAAN
WPPALADAYDKASGALSLVTRDDGKKQWAYNGRPLYRWKMDHKAGDAGGDGIGGMWHVARP

Sequences:

>Translated_141_residues
MTKFFDARPAVPCRNAMPRRTGMKTMLFAVALTAAIARPAAAEPPQAGNGKLVDEDHMTLYVFDHDAPGKSTCTGTCAAN
WPPALADAYDKASGALSLVTRDDGKKQWAYNGRPLYRWKMDHKAGDAGGDGIGGMWHVARP
>Mature_140_residues
TKFFDARPAVPCRNAMPRRTGMKTMLFAVALTAAIARPAAAEPPQAGNGKLVDEDHMTLYVFDHDAPGKSTCTGTCAANW
PPALADAYDKASGALSLVTRDDGKKQWAYNGRPLYRWKMDHKAGDAGGDGIGGMWHVARP

Specific function: Unknown

COG id: COG4315

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15162; Mature: 15031

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKFFDARPAVPCRNAMPRRTGMKTMLFAVALTAAIARPAAAEPPQAGNGKLVDEDHMTL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEE
YVFDHDAPGKSTCTGTCAANWPPALADAYDKASGALSLVTRDDGKKQWAYNGRPLYRWKM
EEEECCCCCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEECCCCCCEEECCCCEEEEEEC
DHKAGDAGGDGIGGMWHVARP
CCCCCCCCCCCCCCEEEECCC
>Mature Secondary Structure 
TKFFDARPAVPCRNAMPRRTGMKTMLFAVALTAAIARPAAAEPPQAGNGKLVDEDHMTL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEE
YVFDHDAPGKSTCTGTCAANWPPALADAYDKASGALSLVTRDDGKKQWAYNGRPLYRWKM
EEEECCCCCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEECCCCCCEEECCCCEEEEEEC
DHKAGDAGGDGIGGMWHVARP
CCCCCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA