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The map label for this gene is 115350442

Identifier: 115350442

GI number: 115350442

Start: 434706

End: 435827

Strand: Direct

Name: 115350442

Synonym: Bamb_0388

Alternate gene names: NA

Gene position: 434706-435827 (Clockwise)

Preceding gene: 115350441

Following gene: 115350443

Centisome position: 12.22

GC content: 68.18

Gene sequence:

>1122_bases
ATGCCGATCAATCTTCCCGAGTTGCTGACGCCGATCAGCGATGCGTCGCCCAGCGGCGACGACCTGCTGTTCTCGAACGA
ATTCGACGCGATCCAGGACGCGCGGCGCTACGATGATCCGACGCTCGACCAGGGCGAGTGGGTGACCGAGATCAAGGAGG
CCGACTGGGGCTTCGTCGTCGATCACGCGGGCGAGTTGCTGCGCACGCGCACCAAGGACCTGCGGCTCGCCGTGTGGCTG
ACCGAGGCGCTCGCGCTGGAGGACGGCATCACCGGCCTCACCGAAGGCTATGCGCTGCTGGAAGGCCTGTGCCGCGACTA
TTGGGACACCGTACATCCGCTGCCGGAAGGCGACGACGTCGAATACCGGCTCGGCAACGTCGCGTGGCTGTCCGGCCGCA
CGGCCGAGTTGCTGCGCGGCATCCCCGTGACGGAAGGCGCGTCGAACGCGTTCACCACGCTCGACTGGGAAGTCGCGCAG
CATGTGGCGCAGGCCGTGAAGCGCGACCCCGAACACGCGGACGACATCGCACGCGGCAAACCGTCGGTCGAGCAGGTCGA
TGCGTCGCGGCGCGTGACGCCGATCGCGTTCTACACGACGCTGCTCGCGAATCTGAAGGCGTTCGAGTTCTCGCTCGATG
CGTTCGAGGAGCGGCTCGTCGAACGTGCGGGCGATTCGGCGCCGAGCTTCCGGCAGGCGCGAGACGCGTTCGAGACCGTG
TACCGGCTCGCCGAGCGCTTTGCGCGCGAGCAGGGCTATACGGGCAGCGCGCCGCATGCGCCGTCGGCACCGCAGGCGCA
GCCCGAGCGCCTCGAGCCGAGCTTCGGCGACGCGTTCCCCATCCAGGAGACCCATGTGCAGTCGCAGACCGCTCCGCGTC
CTCCGATGACGCAAATGATCGCCGGCATCCAGAACCGCGCGCAGGCCGTCGACCAGCTGCGCGCCGTCGCGCGTTACTTC
CGGCAGACCGAGCCGCACAGCCCGGTCGCGTATCTCGCGGACAAGGCCGCCGAATGGGCCGACATGCCGCTGCACAAGTG
GCTCGAGAGCGTCGTGAAGGACGACGGGTCGCTGTCGCATATCCGCGAGCTGCTGGGTGTGAGGCCTGATGAGCAGTCGT
GA

Upstream 100 bases:

>100_bases
CATCGCGCGCATCGCGGTGCGCGCGGACGAGGCCGGCGAATTCGCTTACACCGTCGAATGAGCACCGCCGCGCAACACGC
ATTGATGAACTGACCGAACC

Downstream 100 bases:

>100_bases
GGCAGTCGCGAGCGACGGCTTTGAGACCTGAGAGCGCGGGCGGGTTCGCGATGAACGAGGGCTGTCGCGGTGCACGCGCC
GCTCGCGGACCGTTCTCCGC

Product: ImpA domain-containing protein

Products: NA

Alternate protein names: ImpA Family Type VI Secretion-Associated Protein; ImpA Domain-Containing Protein; ImpA N-Terminal; Type VI Secretion-Associated Protein; ImpA-Related N-Terminal Protein; ImpA-Like; ImpA-Like N-Terminal Family Protein; ImpA-Related N-Terminal Family Protein; Type VI Secretion System Protein TssA; Type VI Secretion System Protein EvpK; Inner Membrane Protein; ImpA Domain Protein; Protein ImpA; ImpA-Related N-Terminal Domain-Containing; ImpA-Related Protein; T6ss A; ImpA-Like Protein

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MPINLPELLTPISDASPSGDDLLFSNEFDAIQDARRYDDPTLDQGEWVTEIKEADWGFVVDHAGELLRTRTKDLRLAVWL
TEALALEDGITGLTEGYALLEGLCRDYWDTVHPLPEGDDVEYRLGNVAWLSGRTAELLRGIPVTEGASNAFTTLDWEVAQ
HVAQAVKRDPEHADDIARGKPSVEQVDASRRVTPIAFYTTLLANLKAFEFSLDAFEERLVERAGDSAPSFRQARDAFETV
YRLAERFAREQGYTGSAPHAPSAPQAQPERLEPSFGDAFPIQETHVQSQTAPRPPMTQMIAGIQNRAQAVDQLRAVARYF
RQTEPHSPVAYLADKAAEWADMPLHKWLESVVKDDGSLSHIRELLGVRPDEQS

Sequences:

>Translated_373_residues
MPINLPELLTPISDASPSGDDLLFSNEFDAIQDARRYDDPTLDQGEWVTEIKEADWGFVVDHAGELLRTRTKDLRLAVWL
TEALALEDGITGLTEGYALLEGLCRDYWDTVHPLPEGDDVEYRLGNVAWLSGRTAELLRGIPVTEGASNAFTTLDWEVAQ
HVAQAVKRDPEHADDIARGKPSVEQVDASRRVTPIAFYTTLLANLKAFEFSLDAFEERLVERAGDSAPSFRQARDAFETV
YRLAERFAREQGYTGSAPHAPSAPQAQPERLEPSFGDAFPIQETHVQSQTAPRPPMTQMIAGIQNRAQAVDQLRAVARYF
RQTEPHSPVAYLADKAAEWADMPLHKWLESVVKDDGSLSHIRELLGVRPDEQS
>Mature_372_residues
PINLPELLTPISDASPSGDDLLFSNEFDAIQDARRYDDPTLDQGEWVTEIKEADWGFVVDHAGELLRTRTKDLRLAVWLT
EALALEDGITGLTEGYALLEGLCRDYWDTVHPLPEGDDVEYRLGNVAWLSGRTAELLRGIPVTEGASNAFTTLDWEVAQH
VAQAVKRDPEHADDIARGKPSVEQVDASRRVTPIAFYTTLLANLKAFEFSLDAFEERLVERAGDSAPSFRQARDAFETVY
RLAERFAREQGYTGSAPHAPSAPQAQPERLEPSFGDAFPIQETHVQSQTAPRPPMTQMIAGIQNRAQAVDQLRAVARYFR
QTEPHSPVAYLADKAAEWADMPLHKWLESVVKDDGSLSHIRELLGVRPDEQS

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41604; Mature: 41472

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPINLPELLTPISDASPSGDDLLFSNEFDAIQDARRYDDPTLDQGEWVTEIKEADWGFVV
CCCCHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEH
DHAGELLRTRTKDLRLAVWLTEALALEDGITGLTEGYALLEGLCRDYWDTVHPLPEGDDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EYRLGNVAWLSGRTAELLRGIPVTEGASNAFTTLDWEVAQHVAQAVKRDPEHADDIARGK
EEEECCEEEECCCHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCHHHHHHHCCC
PSVEQVDASRRVTPIAFYTTLLANLKAFEFSLDAFEERLVERAGDSAPSFRQARDAFETV
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
YRLAERFAREQGYTGSAPHAPSAPQAQPERLEPSFGDAFPIQETHVQSQTAPRPPMTQMI
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHH
AGIQNRAQAVDQLRAVARYFRQTEPHSPVAYLADKAAEWADMPLHKWLESVVKDDGSLSH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHH
IRELLGVRPDEQS
HHHHHCCCCCCCC
>Mature Secondary Structure 
PINLPELLTPISDASPSGDDLLFSNEFDAIQDARRYDDPTLDQGEWVTEIKEADWGFVV
CCCHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEH
DHAGELLRTRTKDLRLAVWLTEALALEDGITGLTEGYALLEGLCRDYWDTVHPLPEGDDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EYRLGNVAWLSGRTAELLRGIPVTEGASNAFTTLDWEVAQHVAQAVKRDPEHADDIARGK
EEEECCEEEECCCHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCHHHHHHHCCC
PSVEQVDASRRVTPIAFYTTLLANLKAFEFSLDAFEERLVERAGDSAPSFRQARDAFETV
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
YRLAERFAREQGYTGSAPHAPSAPQAQPERLEPSFGDAFPIQETHVQSQTAPRPPMTQMI
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHH
AGIQNRAQAVDQLRAVARYFRQTEPHSPVAYLADKAAEWADMPLHKWLESVVKDDGSLSH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHH
IRELLGVRPDEQS
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA