| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115350429
Identifier: 115350429
GI number: 115350429
Start: 420910
End: 421167
Strand: Direct
Name: 115350429
Synonym: Bamb_0375
Alternate gene names: NA
Gene position: 420910-421167 (Clockwise)
Preceding gene: 115350428
Following gene: 115350430
Centisome position: 11.83
GC content: 43.41
Gene sequence:
>258_bases GTGCTGAAAATGAATGATCGTGACGAGAAATTGCAACTGGTGCGTGAGGTAATCGATTTCGTTGTTGAACAACCCTATGA TCCTGAAGTGCTTGCGAAATTTGTGTATCTAAAGTCCCTCGATGCGAGGGTGTATCGCTATGGGGATAAGAGGCTCAATG AAATATTTGATGTGCTCGGGGGGATGAGCGTAGGAGAAGAGTTTTTTTTATTCGAGAGAGGAAGTTTTGGAGATGCTCCA TTCGTTCATTTCGGATAA
Upstream 100 bases:
>100_bases CCGGATTTCGAGGAGAAACATGCGGCTGTCTTCGACAAGCTTGTCTCTGTTTGCGCCAAGTGTTTTGGCGAGTATCAAAG CAGAATTGCCTGACCGGTAG
Downstream 100 bases:
>100_bases CGGATGATTCTTGTTAGGCAAGGATATTTCCTTCGAGGCGCTCGATGGAACTGGCGTGTTCGTCCGTAAGGTGCCACGCG CAATGGACTTCAGATTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MLKMNDRDEKLQLVREVIDFVVEQPYDPEVLAKFVYLKSLDARVYRYGDKRLNEIFDVLGGMSVGEEFFLFERGSFGDAP FVHFG
Sequences:
>Translated_85_residues MLKMNDRDEKLQLVREVIDFVVEQPYDPEVLAKFVYLKSLDARVYRYGDKRLNEIFDVLGGMSVGEEFFLFERGSFGDAP FVHFG >Mature_85_residues MLKMNDRDEKLQLVREVIDFVVEQPYDPEVLAKFVYLKSLDARVYRYGDKRLNEIFDVLGGMSVGEEFFLFERGSFGDAP FVHFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9944; Mature: 9944
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKMNDRDEKLQLVREVIDFVVEQPYDPEVLAKFVYLKSLDARVYRYGDKRLNEIFDVLG CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GMSVGEEFFLFERGSFGDAPFVHFG CCCCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MLKMNDRDEKLQLVREVIDFVVEQPYDPEVLAKFVYLKSLDARVYRYGDKRLNEIFDVLG CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GMSVGEEFFLFERGSFGDAPFVHFG CCCCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA